Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylotuvimicrobium alcaliphilum 20Z (GCF_000968535.2)

Found 38 curated entries in PaperBLAST's database that match '2.3.1.46' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylotuvimicrobium alcaliphilum 20Z, or try another query

MEALZ_RS16705 MEALZ_3413 WP_014149832.1: homoserine O-succinyltransferase
is similar to:
PaperBLAST

METAS_METTV / G3ISL7: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Methylobacter tundripaludum

78% id,
100% cov

METAS_METCA / Q606Y5: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Methylococcus capsulatus

72% id,
100% cov

METAS_ALLVD / D3RNP0: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Allochromatium vinosum

66% id,
99% cov

More...

MEALZ_RS14980 MEALZ_3065 WP_014149493.1: alpha/beta fold hydrolase
is similar to:
PaperBLAST

METXS_NEIGO / A0A0I9QGZ7: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Neisseria gonorrhoeae

33% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory