Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylotuvimicrobium alcaliphilum 20Z (GCF_000968535.2)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Methylotuvimicrobium alcaliphilum 20Z, or try another query

MEALZ_RS04285 MEALZ_0888 WP_014147383.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

AAPAT_NITEU / Q82WA8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Nitrosomonas europaea

 62% id,
99% cov

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

 55% id,
98% cov

AAPAT_RHIME / Q02635: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti
Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

 53% id,
98% cov

More...

alaC MEALZ_RS07605 MEALZ_1560 WP_014148041.1: alanine transaminase
is similar to:		 PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 47% id,
95% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 37% id,
100% cov

AAT_SYNY3 / Q55128: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp.

 33% id,
99% cov

More...

MEALZ_RS13015 MEALZ_2665 WP_014149108.1: branched-chain amino acid transaminase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 45% id,
99% cov

hisC MEALZ_RS12215 MEALZ_2497 WP_014148951.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 42% id,
98% cov

AAT_MUSP7 / C6C2Z3: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Musicola paradisiaca

 22% id,
72% cov

aspB-2 / P14909: aspartate aminotransferase subunit (EC 2.6.1.1) from Saccharolobus solfataricus
P14909: aspartate transaminase (EC 2.6.1.1) from Saccharolobus solfataricus

 22% id,
43% cov

MEALZ_RS15710 MEALZ_3218 WP_014149643.1: aminotransferase class V-fold PLP-dependent enzyme
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 39% id,
98% cov

MEALZ_RS13915 MEALZ_2861 WP_014149291.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

 33% id,
99% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 33% id,
99% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 33% id,
98% cov

More...

dapC MEALZ_RS06145 MEALZ_1260 WP_014147748.1: succinyldiaminopimelate transaminase
is similar to:		 PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 31% id,
94% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 26% id,
100% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 28% id,
83% cov

More...

MEALZ_RS16585 MEALZ_3390 WP_014149809.1: D-amino acid aminotransferase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 27% id,
91% cov

rffA MEALZ_RS13340 MEALZ_2739 WP_014149177.1: dTDP-4-amino-4,6-dideoxygalactose transaminase
is similar to:		 PaperBLAST

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

 29% id,
47% cov

AAPAT_NITEU / Q82WA8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Nitrosomonas europaea

 33% id,
24% cov

AAPAT_RHIME / Q02635: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti
Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

 32% id,
23% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory