Searching in Methylotuvimicrobium alcaliphilum 20Z (GCF_000968535.2)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Methylotuvimicrobium alcaliphilum 20Z, or try another query
| MEALZ_RS04635 MEALZ_0955 WP_014147450.1: homoserine kinase is similar to: | PaperBLAST |
KHSE_PSEAE / P29364: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Pseudomonas aeruginosa | 35% id, 97% cov |
Ga0059261_3253: homoserine kinase (EC 2.7.1.39) from Sphingomonas koreensis | 33% id, 95% cov |
| aroK MEALZ_RS15790 MEALZ_3235 WP_046061206.1: shikimate kinase AroK is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 33% id, 85% cov |
| ispE MEALZ_RS16480 MEALZ_3370 WP_014149789.1: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase is similar to: | PaperBLAST |
KHSE_ECOLI / P00547: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Escherichia coli | 22% id, 75% cov |
Echvi_2001: homoserine kinase (EC 2.7.1.39) from Echinicola vietnamensis | 22% id, 65% cov |
| MEALZ_RS08240 MEALZ_1692 WP_014148172.1: gluconokinase is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 36% id, 30% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3749879-3750436 (frame -2) on NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z, complete sequence is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 32% id, 89% cov |
| 3883554-3884414 (frame -1) on NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z, complete sequence is similar to: | PaperBLAST |
thrB / Q58504: homoserine kinase monomer (EC 2.7.1.39) from Methanocaldococcus jannaschii | 22% id, 67% cov |
Lawrence Berkeley National Laboratory