Curated BLAST for Genomes

 

Curated BLAST

Searching in Nitriliruptor alkaliphilus DSM 45188 (GCF_000969705.1)

Found 26 curated entries in PaperBLAST's database that match '1.13.11.27' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Nitriliruptor alkaliphilus DSM 45188, or try another query

hppD NITAL_RS00610 WP_052669195.1: 4-hydroxyphenylpyruvate dioxygenase
is similar to:
PaperBLAST

HPPD_STRAW / Q53586: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Streptomyces avermitilis

58% id,
96% cov

Q6KZ98: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Picrophilus torridus

48% id,
94% cov

HPPD_HUMAN / P32754: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Homo sapiens
HPD / P32754: 4-hydroxyphenylpyruvate dioxygenase subunit (EC 1.13.11.27) from Homo sapiens
P32754: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Homo sapiens

47% id,
92% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory