Searching in Nitriliruptor alkaliphilus DSM 45188 (GCF_000969705.1)
Found 13 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Nitriliruptor alkaliphilus DSM 45188, or try another query
| NITAL_RS17220 WP_211262474.1: prephenate dehydrogenase/arogenate dehydrogenase family protein is similar to: | PaperBLAST |
TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis | 33% id, 99% cov |
TYRA_MYCTU / O69721: Prephenate dehydrogenase; PDH; EC 1.3.1.12 from Mycobacterium tuberculosis | 34% id, 93% cov |
Q81P63: prephenate dehydrogenase (EC 1.3.1.12) from Bacillus anthracis | 31% id, 94% cov |
| sucB NITAL_RS19475 WP_052667835.1: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 28% id, 74% cov |
| pheA NITAL_RS06650 WP_052665326.1: prephenate dehydratase is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 34% id, 44% cov |
| NITAL_RS11450 WP_052666338.1: dihydrolipoamide acetyltransferase family protein is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 29% id, 47% cov |
| lpdA NITAL_RS19470 WP_083441794.1: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 30% id, 18% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2455351-2456970 (frame +1) on NZ_KQ033901.1 Nitriliruptor alkaliphilus DSM 45188 NitalDRAFT_Scaffold1.1, whole genome shotgun sequence is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 31% id, 86% cov |
Lawrence Berkeley National Laboratory