Curated BLAST for Genomes

 

Curated BLAST

Searching in Nitriliruptor alkaliphilus DSM 45188 (GCF_000969705.1)

Found 38 curated entries in PaperBLAST's database that match '2.3.1.46' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Nitriliruptor alkaliphilus DSM 45188, or try another query

NITAL_RS02030 WP_052664420.1: homoserine O-succinyltransferase
is similar to:
PaperBLAST

METAS_METCA / Q606Y5: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Methylococcus capsulatus

57% id,
99% cov

METAS_METTV / G3ISL7: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Methylobacter tundripaludum

56% id,
100% cov

METAS_ALLVD / D3RNP0: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Allochromatium vinosum

56% id,
99% cov

More...

NITAL_RS19805 WP_052667927.1: alpha/beta hydrolase
is similar to:
PaperBLAST

METXS_BREDA / F4QV02: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Brevundimonas diminuta

29% id,
40% cov

NITAL_RS00130 WP_052664089.1: alpha/beta fold hydrolase
is similar to:
PaperBLAST

SST_XANCP / Q8P8L2: Serine O-succinyltransferase; SST; Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.-; EC 2.3.1.46 from Xanthomonas campestris

35% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory