Curated BLAST for Genomes

 

Curated BLAST

Searching in Nitriliruptor alkaliphilus DSM 45188 (GCF_000969705.1)

Found 5 curated entries in PaperBLAST's database that match '2.6.1.66' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Nitriliruptor alkaliphilus DSM 45188, or try another query

NITAL_RS17580 WP_245617685.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

33% id,
94% cov

NITAL_RS11740 WP_052666387.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

29% id,
98% cov

NITAL_RS21545 WP_083441868.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

34% id,
83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory