Curated BLAST for Genomes

 

Curated BLAST

Searching in Nitriliruptor alkaliphilus DSM 45188 (GCF_000969705.1)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Nitriliruptor alkaliphilus DSM 45188, or try another query

trpE NITAL_RS18710 WP_052667665.1: anthranilate synthase component I
is similar to:
PaperBLAST

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

49% id,
99% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

49% id,
98% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

44% id,
98% cov

More...

NITAL_RS26705 WP_211262535.1: anthranilate synthase component I family protein
is similar to:
PaperBLAST

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

39% id,
90% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

36% id,
95% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

38% id,
90% cov

More...

NITAL_RS02255 WP_211262153.1: isochorismate synthase
is similar to:
PaperBLAST

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

30% id,
57% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

30% id,
57% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

33% id,
51% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory