Curated BLAST

Curated BLAST for Genomes

Found 17 curated entries in PaperBLAST's database that match '1.1.2.3' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Chromobacterium vaccinii MWU205, or try another query

VL52_RS18665 WP_046158448.1: LutB/LldF family L-lactate oxidation iron-sulfur protein is similar to:	PaperBLAST
lldG / Q8EGS5: L-lactate dehydrogenase iron-sulfur cluster-binding protein LldF (EC 1.1.2.3) from Shewanella oneidensis	38% id, 92% cov
DVU_3033 / Q726S3: quinone-dependent L-lactate dehydrogenase large subunit (EC 1.1.2.3) from Desulfovibrio vulgaris	39% id, 56% cov

VL52_RS18655 WP_046158446.1: (Fe-S)-binding protein is similar to:	PaperBLAST
lldE / Q8EGS4: L-lactate dehydrogenase LldE subunit (EC 1.1.2.3) from Shewanella oneidensis	29% id, 98% cov
DVU_3033 / Q726S3: quinone-dependent L-lactate dehydrogenase large subunit (EC 1.1.2.3) from Desulfovibrio vulgaris	28% id, 34% cov

VL52_RS18660 WP_046158447.1: lactate utilization protein C is similar to:	PaperBLAST
DVU_3032 / Q726S4: quinone-dependent L-lactate dehydrogenase small subunit (EC 1.1.2.3) from Desulfovibrio vulgaris	36% id, 52% cov
lldF / Q8EGS6: L-lactate dehydrogenase LldF subunit (EC 1.1.2.3) from Shewanella oneidensis	28% id, 63% cov

VL52_RS03845 WP_268753677.1: nitronate monooxygenase is similar to:	PaperBLAST
SM_b20850: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Sinorhizobium meliloti	33% id, 24% cov

gltB VL52_RS08785 WP_046156674.1: glutamate synthase large subunit is similar to:	PaperBLAST
Q9HV37: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas aeruginosa	32% id, 19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory