Curated BLAST
Searching in Chromobacterium vaccinii MWU205 (GCF_000971335.1)
Found 47 curated entries in PaperBLAST's database that match '4.1.1.17' as complete word(s).
These curated entries have 35 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Chromobacterium vaccinii MWU205, or try another query
VL52_RS08800 WP_046156677.1: arginine/lysine/ornithine decarboxylase
is similar to: | PaperBLAST |
A4Q8H0: ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens | 33% id,
95% cov |
H8ZI01: ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis | 34% id,
91% cov |
SpeC / b2965: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
speC / P21169: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
P21169: ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 32% id,
96% cov |
P43099: ornithine decarboxylase (EC 4.1.1.17) from Ligilactobacillus saerimneri | 33% id,
90% cov |
Q5ZH57: ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni | 33% id,
89% cov |
A0A1V3Y1D0: ornithine decarboxylase (EC 4.1.1.17) from Lactobacillus gasseri | 31% id,
89% cov |
Q038E5: ornithine decarboxylase (EC 4.1.1.17) from Lacticaseibacillus casei | 31% id,
86% cov |
DCOS_ECOLI / P24169: Inducible ornithine decarboxylase; EC 4.1.1.17 from Escherichia coli
SpeF / b0693: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
speF / P24169: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 36% id,
53% cov |
More... |
VL52_RS21315 WP_046158929.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to: | PaperBLAST |
SpeC / b2965: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
speC / P21169: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
P21169: ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 34% id,
64% cov |
H8ZI01: ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis | 33% id,
59% cov |
A4Q8H0: ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens | 35% id,
54% cov |
A0A1V3Y1D0: ornithine decarboxylase (EC 4.1.1.17) from Lactobacillus gasseri | 32% id,
54% cov |
DCOS_ECOLI / P24169: Inducible ornithine decarboxylase; EC 4.1.1.17 from Escherichia coli
SpeF / b0693: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
speF / P24169: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 35% id,
48% cov |
Q5ZH57: ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni | 31% id,
54% cov |
P43099: ornithine decarboxylase (EC 4.1.1.17) from Ligilactobacillus saerimneri | 33% id,
50% cov |
Q038E5: ornithine decarboxylase (EC 4.1.1.17) from Lacticaseibacillus casei | 30% id,
50% cov |
Q038E5: ornithine decarboxylase (EC 4.1.1.17) from Lacticaseibacillus casei | 28% id,
15% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory