Curated BLAST for Genomes

 

Curated BLAST

Searching in Aurantiacibacter gangjinensis K7-2 (GCF_001010925.1)

Found 8 curated entries in PaperBLAST's database that match '1.1.1.140' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Aurantiacibacter gangjinensis K7-2, or try another query

AAW01_RS11455 AAW01_11485 WP_047007388.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

D4I194: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Erwinia amylovora

33% id,
99% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
97% cov

AAW01_RS06205 AAW01_06220 WP_047006347.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
95% cov

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

29% id,
94% cov

D4I194: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Erwinia amylovora

32% id,
77% cov

phbB AAW01_RS07585 AAW01_07595 WP_047006795.1: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

D4I194: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Erwinia amylovora

29% id,
100% cov

SRLD_ECOLI / P05707: Sorbitol-6-phosphate 2-dehydrogenase; Glucitol-6-phosphate dehydrogenase; Ketosephosphate reductase; EC 1.1.1.140 from Escherichia coli
GutD / b2705: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli
srlD / P05707: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli

28% id,
100% cov

BWI76_RS22230: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

28% id,
100% cov

fabG AAW01_RS01220 AAW01_01225 WP_047005555.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

30% id,
94% cov

AAW01_RS03665 AAW01_03670 WP_047005948.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

29% id,
96% cov

AAW01_RS01450 AAW01_01455 WP_047005591.1: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

BWI76_RS22230: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

28% id,
98% cov

SRLD_ECOLI / P05707: Sorbitol-6-phosphate 2-dehydrogenase; Glucitol-6-phosphate dehydrogenase; Ketosephosphate reductase; EC 1.1.1.140 from Escherichia coli
GutD / b2705: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli
srlD / P05707: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli

27% id,
98% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
97% cov

More...

AAW01_RS01350 AAW01_01355 WP_047005576.1: SDR family oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
74% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory