Curated BLAST for Genomes

 

Curated BLAST

Searching in Aurantiacibacter marinus HWDM-33 (GCF_001013305.1)

Found 8 curated entries in PaperBLAST's database that match '4.1.3.25' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Aurantiacibacter marinus HWDM-33, or try another query

AAV99_RS01470 AAV99_01470 WP_047092194.1: CoA ester lyase
is similar to:
PaperBLAST

Q9I562: (S)-citramalyl-CoA lyase (EC 4.1.3.25) from Pseudomonas aeruginosa

30% id,
96% cov

CLYBL_MOUSE / Q8R4N0: Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein, mitochondrial; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Mus musculus

32% id,
86% cov

A0A172MLA1: (S)-citramalyl-CoA lyase (EC 4.1.3.25); (R)-citramalyl-CoA lyase (EC 4.1.3.46) from Aspergillus terreus

29% id,
92% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory