Curated BLAST for Genomes

 

Curated BLAST

Searching in Chryseobacterium angstadtii KM (GCF_001045465.1)

Found 135 curated entries in PaperBLAST's database that match '3.2.1.28' as complete word(s).

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Chryseobacterium angstadtii KM, or try another query

ACM46_RS07835 ACM46_07845 WP_048506064.1: trehalase family glycosidase
is similar to:
PaperBLAST

TREA_ECOLI / P13482: Periplasmic trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; Tre37A; EC 3.2.1.28 from Escherichia coli
Tre / b1197: periplasmic trehalase (EC 3.2.1.28) from Escherichia coli
AAC74281.1: α,α-trehalase (periplasmic) (TreA;OsmA) (Tre37A) (EC 3.2.1.28)
treA / P13482: periplasmic trehalase (EC 3.2.1.28) from Escherichia coli

44% id,
85% cov

Q63MI6: alpha,alpha-trehalase (EC 3.2.1.28) from Burkholderia pseudomallei

43% id,
86% cov

Q3BXX2: alpha,alpha-trehalase (EC 3.2.1.28) from Xanthomonas campestris

43% id,
86% cov

More...

ACM46_RS05825 ACM46_05835 WP_048505707.1: alpha-amylase family glycosyl hydrolase
is similar to:
PaperBLAST

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

28% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory