Searching in Novosphingobium barchaimii LL02 (GCF_001046635.1)
Found 52 curated entries in PaperBLAST's database that match '3.1.3.3' as complete word(s).
These curated entries have 39 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Novosphingobium barchaimii LL02, or try another query
| serB V474_RS04385 V474_10005 WP_236710639.1: phosphoserine phosphatase SerB is similar to: | PaperBLAST |
SERB_STRT2 / Q5M3B3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Streptococcus thermophilus | 47% id, 96% cov |
SERB_IDILO / Q5QXU4: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Idiomarina loihiensis | 44% id, 96% cov |
SERB_LACLA / Q9CHW3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Lactococcus lactis | 43% id, 94% cov |
| gpmA V474_RS18260 V474_24890 WP_059152825.1: 2,3-diphosphoglycerate-dependent phosphoglycerate mutase is similar to: | PaperBLAST |
ABIE51_RS06160: phosphoserine phosphatase (EC 3.1.3.3) from Lysobacter sp. | 30% id, 83% cov |
PSPA_HYDTT / D3DFG8: Phosphoserine phosphatase 1; PSP 1; PSPase 1; Metal-independent phosphoserine phosphatase 1; iPSP1; O-phosphoserine phosphohydrolase 1; EC 3.1.3.3 from Hydrogenobacter thermophilus | 28% id, 78% cov |
| serA V474_RS00340 V474_00345 WP_059149611.1: phosphoglycerate dehydrogenase is similar to: | PaperBLAST |
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis | 34% id, 58% cov |
| V474_RS11805 V474_18180 WP_059151692.1: nitronate monooxygenase is similar to: | PaperBLAST |
SERB_MYCA1 / A0QJI1: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Mycobacterium avium | 26% id, 66% cov |
| V474_RS00295 V474_00300 WP_059149602.1: HAD family phosphatase is similar to: | PaperBLAST |
PSP_THET2 / Q72H00: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Thermus thermophilus | 32% id, 44% cov |
| V474_RS01110 V474_01135 WP_059149735.1: 2-hydroxyacid dehydrogenase is similar to: | PaperBLAST |
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis | 26% id, 40% cov |
| V474_RS02805 V474_08385 WP_059150015.1: D-2-hydroxyacid dehydrogenase is similar to: | PaperBLAST |
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis | 23% id, 40% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 277288-278400 (frame -3) on NZ_KQ130454.1 Novosphingobium barchaimii LL02 25411_scaffold_03, whole genome shotgun sequence is similar to: | PaperBLAST |
SERB_MYCA1 / A0QJI1: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Mycobacterium avium | 25% id, 74% cov |
Lawrence Berkeley National Laboratory