Searching in Novosphingobium barchaimii LL02 (GCF_001046635.1)
Found 61 curated entries in PaperBLAST's database that match '5.4.99.5' as complete word(s).
These curated entries have 44 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Novosphingobium barchaimii LL02, or try another query
trpE V474_RS03180 V474_08765 WP_059150076.1: anthranilate synthase component I is similar to: | PaperBLAST |
MBTI_MYCTU / P9WFX1: Salicylate synthase; Chorismate mutase; CM; Isochorismate synthase/isochorismate lyase; Mycobactin synthase protein; EC 5.4.99.5; EC 4.2.99.21; EC 5.4.4.2 from Mycobacterium tuberculosis | 28% id, 92% cov |
V474_RS17425 V474_24040 WP_059152706.1: prephenate dehydratase is similar to: | PaperBLAST |
CMPDT_ECOLI / P0A9J8: Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli | 33% id, 72% cov |
C7EXK8: prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Escherichia coli | 32% id, 72% cov |
CMPDT_STUST / P27603: Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Stutzerimonas stutzeri | 29% id, 75% cov |
pabB V474_RS13600 V474_20030 WP_059151980.1: aminodeoxychorismate synthase component I is similar to: | PaperBLAST |
MBTI_MYCTU / P9WFX1: Salicylate synthase; Chorismate mutase; CM; Isochorismate synthase/isochorismate lyase; Mycobactin synthase protein; EC 5.4.99.5; EC 4.2.99.21; EC 5.4.4.2 from Mycobacterium tuberculosis | 29% id, 56% cov |
V474_RS01455 V474_01475 WP_059149791.1: chorismate mutase is similar to: | PaperBLAST |
CA265_RS11635: chorismate mutase (EC 5.4.99.5); 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Pedobacter sp. | 34% id, 23% cov |
V474_RS13280 V474_19695 WP_059151930.1: threonine ammonia-lyase is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 33% id, 17% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
295366-296871 (frame -3) on NZ_KQ130452.1 Novosphingobium barchaimii LL02 25411_scaffold_01, whole genome shotgun sequence is similar to: | PaperBLAST |
CA265_RS11635: chorismate mutase (EC 5.4.99.5); 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Pedobacter sp. | 31% id, 32% cov |
Lawrence Berkeley National Laboratory