Curated BLAST for Genomes

 

Curated BLAST

Searching in Herbaspirillum autotrophicum IAM 14942 (GCF_001189915.1)

Found 1 curated entries in PaperBLAST's database that match '1.5.99.8' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 31 relevant proteins in Herbaspirillum autotrophicum IAM 14942, or try another query

putA AKL27_RS04800 WP_050461642.1: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

59% id,
95% cov

AKL27_RS00980 WP_157056737.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

33% id,
35% cov

AKL27_RS26270 WP_050465865.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

32% id,
33% cov

AKL27_RS00975 WP_050460694.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

31% id,
34% cov

AKL27_RS13585 WP_050463371.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
34% cov

AKL27_RS18955 WP_050464411.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
35% cov

AKL27_RS14140 WP_050463474.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
36% cov

gabD AKL27_RS02365 WP_050461045.1: NADP-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
33% cov

AKL27_RS16040 WP_050463862.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
34% cov

gabD AKL27_RS01645 WP_050460863.1: NADP-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
33% cov

AKL27_RS18540 WP_050464339.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
34% cov

AKL27_RS15280 WP_050463708.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
34% cov

AKL27_RS18980 WP_050464416.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
34% cov

AKL27_RS23165 WP_050465245.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
33% cov

AKL27_RS18940 WP_050464408.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
35% cov

AKL27_RS26225 WP_050465856.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
34% cov

AKL27_RS26725 WP_050465948.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
32% cov

AKL27_RS15600 WP_050463776.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
33% cov

adh AKL27_RS23455 WP_050465302.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
33% cov

AKL27_RS14305 WP_050463605.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
33% cov

AKL27_RS01345 WP_050460767.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

27% id,
34% cov

AKL27_RS24900 WP_050465588.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
33% cov

AKL27_RS21860 WP_050464991.1: 2-hydroxymuconic semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
33% cov

AKL27_RS02830 WP_050461213.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

27% id,
34% cov

AKL27_RS14215 WP_050463486.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
32% cov

hpaE AKL27_RS13610 WP_050463394.1: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

27% id,
33% cov

AKL27_RS02410 WP_050461054.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

26% id,
33% cov

AKL27_RS06110 WP_050461897.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

26% id,
33% cov

AKL27_RS08975 WP_050462475.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

27% id,
32% cov

AKL27_RS00280 WP_050460579.1: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

27% id,
25% cov

AKL27_RS26960 WP_157057143.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

26% id,
5% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 30 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory