Curated BLAST for Genomes

 

Curated BLAST

Searching in Herbaspirillum autotrophicum IAM 14942 (GCF_001189915.1)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 25 relevant proteins in Herbaspirillum autotrophicum IAM 14942, or try another query

AKL27_RS04650 WP_050461615.1: acetyl-CoA C-acetyltransferase
is similar to:		 PaperBLAST

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

 76% id,
100% cov

phaA / Q3IZW1: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Cereibacter sphaeroides

 67% id,
100% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

 66% id,
100% cov

More...

bktB AKL27_RS00755 WP_050460653.1: beta-ketothiolase BktB
is similar to:		 PaperBLAST

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator
Q0KBP1: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Cupriavidus necator

 75% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

 52% id,
99% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

 52% id,
99% cov

More...

AKL27_RS20505 WP_050464727.1: acetyl-CoA C-acetyltransferase
is similar to:		 PaperBLAST

Ac3H11_2994: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Acidovorax sp.

 72% id,
99% cov

Mpe_A3367 / A2SL81: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methylibium petroleiphilum

 65% id,
99% cov

PfGW456L13_2982: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Pseudomonas fluorescens

 65% id,
99% cov

More...

pcaF AKL27_RS11635 WP_050462987.1: 3-oxoadipyl-CoA thiolase
is similar to:		 PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

 69% id,
100% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

 46% id,
99% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

 46% id,
99% cov

More...

pcaF AKL27_RS08250 WP_050462335.1: 3-oxoadipyl-CoA thiolase
is similar to:		 PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

 68% id,
100% cov

Sama_0031: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella amazonensis

 46% id,
100% cov

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator
Q0KBP1: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Cupriavidus necator

 45% id,
100% cov

More...

AKL27_RS00905 WP_050460680.1: lipid-transfer protein
is similar to:		 PaperBLAST

tioL / Q5P8S8: 3-oxoacyl CoA thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

 57% id,
98% cov

SCP2_RABIT / O62742: Sterol carrier protein 2; SCP-2; Acetyl-CoA C-myristoyltransferase; Non-specific lipid-transfer protein; NSL-TP; Propanoyl-CoA C-acyltransferase; SCP-2/3-oxoacyl-CoA thiolase; SCP-2/thiolase; SCP-chi; SCPX; Sterol carrier protein X; SCP-X; EC 2.3.1.155; EC 2.3.1.176; EC 2.3.1.16 from Oryctolagus cuniculus

 51% id,
72% cov

SCP2_CHICK / Q07598: Sterol carrier protein 2; SCP-2; Acetyl-CoA C-myristoyltransferase; Non-specific lipid-transfer protein; NSL-TP; Propanoyl-CoA C-acyltransferase; SCP-2/3-oxoacyl-CoA thiolase; SCP-2/thiolase; SCP-chi; SCPX; Sterol carrier protein X; SCP-X; EC 2.3.1.155; EC 2.3.1.176; EC 2.3.1.16 from Gallus gallus

 52% id,
71% cov

More...

AKL27_RS23765 WP_050465357.1: acetyl-CoA C-acetyltransferase
is similar to:		 PaperBLAST

FADA6_MYCTU / I6XHJ3: Steroid 3-ketoacyl-CoA thiolase FadA6; Acetyl-CoA acetyltransferase FadA6; EC 2.3.1.16 from Mycobacterium tuberculosis
fadA6 / I6XHJ3: 3-oxo-acyl CoA thiolase (EC 2.3.1.16) from Mycobacterium tuberculosis

 52% id,
95% cov

FADA5_MYCTU / I6XHI4: Steroid 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase FadA5; Beta-ketoacyl-CoA thiolase; EC 2.3.1.16 from Mycobacterium tuberculosis
fadA5 / I6XHI4: steroid 3-ketoacyl-CoA thiolase monomer (EC 2.3.1.16; EC 2.3.1.176) from Mycobacterium tuberculosis

 41% id,
100% cov

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

 41% id,
100% cov

More...

AKL27_RS04625 WP_050461610.1: acetyl-CoA C-acyltransferase
is similar to:		 PaperBLAST

FADA_BACSU / O32177: 3-ketoacyl-CoA thiolase; Acetyl-CoA acyltransferase; Beta-ketothiolase; EC 2.3.1.16 from Bacillus subtilis

 49% id,
99% cov

Shewana3_0023: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella sp.

 44% id,
100% cov

Sama_0031: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella amazonensis

 44% id,
100% cov

More...

AKL27_RS08290 WP_050462343.1: thiolase family protein
is similar to:		 PaperBLAST

G3CH53: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Ovis aries

 41% id,
98% cov

THIM_HUMAN / P42765: 3-ketoacyl-CoA thiolase, mitochondrial; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; Acyl-CoA hydrolase, mitochondrial; Beta-ketothiolase; Mitochondrial 3-oxoacyl-CoA thiolase; T1; EC 2.3.1.16; EC 2.3.1.9; EC 3.1.2.-; EC 3.1.2.1; EC 3.1.2.2 from Homo sapiens
ACAA2 / P42765: 3-ketoacyl-CoA thiolase, mitochondrial (EC 2.3.1.16) from Homo sapiens
P42765: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Homo sapiens

 41% id,
98% cov

Q8BWT1: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Mus musculus

 40% id,
98% cov

More...

AKL27_RS25525 WP_050465716.1: thiolase family protein
is similar to:		 PaperBLAST

tioL / Q5P8S8: 3-oxoacyl CoA thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

 37% id,
96% cov

mvaE / A0A384E138: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methanothermococcus thermolithotrophicus

 33% id,
96% cov

Q66Q58: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Spodoptera littoralis

 37% id,
71% cov

More...

AKL27_RS24850 WP_050465579.1: acetyl-CoA acetyltransferase
is similar to:		 PaperBLAST

tioL / Q5P8S8: 3-oxoacyl CoA thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

 29% id,
97% cov

mvaE / A0A384E138: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methanothermococcus thermolithotrophicus

 33% id,
86% cov

SCP2_RABIT / O62742: Sterol carrier protein 2; SCP-2; Acetyl-CoA C-myristoyltransferase; Non-specific lipid-transfer protein; NSL-TP; Propanoyl-CoA C-acyltransferase; SCP-2/3-oxoacyl-CoA thiolase; SCP-2/thiolase; SCP-chi; SCPX; Sterol carrier protein X; SCP-X; EC 2.3.1.155; EC 2.3.1.176; EC 2.3.1.16 from Oryctolagus cuniculus

 31% id,
73% cov

More...

AKL27_RS00935 WP_050460686.1: thiolase family protein
is similar to:		 PaperBLAST

tioL / Q5P8S8: 3-oxoacyl CoA thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

 28% id,
92% cov

SCP2_RABIT / O62742: Sterol carrier protein 2; SCP-2; Acetyl-CoA C-myristoyltransferase; Non-specific lipid-transfer protein; NSL-TP; Propanoyl-CoA C-acyltransferase; SCP-2/3-oxoacyl-CoA thiolase; SCP-2/thiolase; SCP-chi; SCPX; Sterol carrier protein X; SCP-X; EC 2.3.1.155; EC 2.3.1.176; EC 2.3.1.16 from Oryctolagus cuniculus

 25% id,
51% cov

AKL27_RS06325 WP_050461956.1: hydroxymethylglutaryl-CoA reductase, degradative
is similar to:		 PaperBLAST

mvaE / Q9FD70: acetyl-CoA acetyltransferase/HMG-CoA reductase (EC 1.1.1.34; EC 2.3.1.16) from Enterococcus faecalis

 40% id,
51% cov

paaH AKL27_RS11620 WP_050462984.1: 3-hydroxyacyl-CoA dehydrogenase PaaH
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 34% id,
36% cov

AKL27_RS01460 WP_050460782.1: enoyl-CoA hydratase
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 28% id,
33% cov

AKL27_RS00730 WP_050460648.1: crotonase/enoyl-CoA hydratase family protein
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 29% id,
32% cov

AKL27_RS23795 WP_050465361.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 31% id,
29% cov

AKL27_RS10475 WP_050462771.1: enoyl-CoA hydratase
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 39% id,
23% cov

fabF AKL27_RS24320 WP_050465471.1: beta-ketoacyl-ACP synthase II
is similar to:		 PaperBLAST

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

 29% id,
31% cov

phaA / Q3IZW1: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Cereibacter sphaeroides

 33% id,
23% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

 31% id,
21% cov

More...

AKL27_RS13260 WP_050463313.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 29% id,
30% cov

AKL27_RS08280 WP_050462341.1: crotonase/enoyl-CoA hydratase family protein
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 32% id,
26% cov

AKL27_RS11640 WP_050462988.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 32% id,
26% cov

AKL27_RS23760 WP_050465356.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 34% id,
22% cov

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 26% id,
24% cov

AKL27_RS13300 WP_050463319.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 31% id,
24% cov

AKL27_RS15360 WP_050463723.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 28% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 24 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

53521-54390 (frame +1) on NZ_LFLS01000015.1 Herbaspirillum autotrophicum strain IAM 14942 contig15, whole genome shotgun sequence
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

 28% id,
32% cov

38359-40083 (frame +1) on NZ_LFLS01000041.1 Herbaspirillum autotrophicum strain IAM 14942 contig41, whole genome shotgun sequence
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

 33% id,
25% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory