Searching in Herbaspirillum autotrophicum IAM 14942 (GCF_001189915.1)
Found 32 curated entries in PaperBLAST's database that match '2.7.1.71' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum autotrophicum IAM 14942, or try another query
| aroKB AKL27_RS19905 WP_050464609.1: bifunctional shikimate kinase/3-dehydroquinate synthase AroKB is similar to: | PaperBLAST |
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii | 56% id, 93% cov |
AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli | 49% id, 96% cov |
AROK_MYCTU / P9WPY3: Shikimate kinase; SK; EC 2.7.1.71 from Mycobacterium tuberculosis | 41% id, 100% cov |
| AKL27_RS24550 WP_050465518.1: shikimate kinase is similar to: | PaperBLAST |
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii | 24% id, 93% cov |
SK3_ORYSJ / Q7X7H9: Shikimate kinase 3, chloroplastic; OsSK3; EC 2.7.1.71 from Oryza sativa | 27% id, 40% cov |
SK1_ORYSJ / Q5NTH4: Shikimate kinase 1, chloroplastic; OsSK1; EC 2.7.1.71 from Oryza sativa | 27% id, 38% cov |
| aroA AKL27_RS16315 WP_050463908.1: 3-phosphoshikimate 1-carboxyvinyltransferase is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 38% id, 29% cov |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 39% id, 27% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory