Curated BLAST for Genomes

 

Curated BLAST

Searching in Herbaspirillum autotrophicum IAM 14942 (GCF_001189915.1)

Found 6 curated entries in PaperBLAST's database that match 'acetohydroxy-acid synthase%large' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Herbaspirillum autotrophicum IAM 14942, or try another query

AKL27_RS09690 WP_050462618.1: acetolactate synthase 3 catalytic subunit
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

43% id,
99% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

47% id,
92% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

44% id,
95% cov

More...

AKL27_RS16985 WP_050464048.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

33% id,
97% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

31% id,
89% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

30% id,
91% cov

More...

gcl AKL27_RS11775 WP_050463021.1: glyoxylate carboligase
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

35% id,
92% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

33% id,
98% cov

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

33% id,
85% cov

More...

AKL27_RS16720 WP_050463984.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

29% id,
97% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

28% id,
94% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

28% id,
88% cov

More...

AKL27_RS02420 WP_050461056.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

30% id,
96% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

28% id,
91% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

31% id,
55% cov

More...

AKL27_RS00600 WP_050460626.1: thiamine pyrophosphate-dependent enzyme
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

29% id,
94% cov

ILVB2_MYCTU / O06335: Putative acetolactate synthase large subunit IlvB2; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

27% id,
97% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

28% id,
92% cov

More...

AKL27_RS15290 WP_050463710.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

26% id,
86% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

25% id,
91% cov

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

30% id,
23% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

107197-108918 (frame -1) on NZ_LFLS01000018.1 Herbaspirillum autotrophicum strain IAM 14942 contig18, whole genome shotgun sequence
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis
Also see hits to annotated proteins above

26% id,
88% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory