Curated BLAST for Genomes

 

Curated BLAST

Searching in Cronobacter universalis NCTC 9529 (GCF_001277175.1)

Found 37 curated entries in PaperBLAST's database that match '3.5.99.6' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Cronobacter universalis NCTC 9529, or try another query

nagB AFK65_RS05930 AFK65_05930 WP_007706747.1: glucosamine-6-phosphate deaminase
is similar to:
PaperBLAST

NAGB_ECO57 / P0A760: Glucosamine-6-phosphate deaminase; GlcN6P deaminase; GNPDA; Glucosamine-6-phosphate isomerase; EC 3.5.99.6 from Escherichia coli
NAGB_ECOLI / P0A759: Glucosamine-6-phosphate deaminase; GlcN6P deaminase; GNPDA; Glucosamine-6-phosphate isomerase; EC 3.5.99.6 from Escherichia coli
GlmD / b0678: glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Escherichia coli
nagB / PDB|1CD5: GlcN6P deaminase; EC 3.5.99.6 from Escherichia coli
nagB / P0A759: glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Escherichia coli

89% id,
100% cov

GNPI1_BOVIN / A4FV08: Glucosamine-6-phosphate isomerase 1; Glucosamine-6-phosphate deaminase 1; GNPDA 1; GlcN6P deaminase 1; Oscillin; EC 3.5.99.6 from Bos taurus

64% id,
89% cov

E1C878: glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Gallus gallus

61% id,
94% cov

More...

glmS AFK65_RS19815 AFK65_19860 WP_007703655.1: glutamine--fructose-6-phosphate transaminase (isomerizing)
is similar to:
PaperBLAST

AO353_04455: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens

30% id,
96% cov

PGA1_c27890: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Phaeobacter inhibens

30% id,
97% cov

Sama_0945: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella amazonensis

29% id,
98% cov

More...

AFK65_RS15475 AFK65_15515 WP_007701320.1: MurR/RpiR family transcriptional regulator
is similar to:
PaperBLAST

Ga0059261_1644: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Sphingomonas koreensis

29% id,
55% cov

CCNA_00453: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Caulobacter crescentus

36% id,
29% cov

AFK65_RS14615 AFK65_14655 WP_007700594.1: MurR/RpiR family transcriptional regulator
is similar to:
PaperBLAST

CCNA_00453: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Caulobacter crescentus

30% id,
30% cov

murQ AFK65_RS14775 AFK65_14815 WP_007700663.1: N-acetylmuramic acid 6-phosphate etherase
is similar to:
PaperBLAST

BPHYT_RS02735: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Burkholderia phytofirmans

31% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory