Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Thermus aquaticus YT-1 (GCF_001280255.1)

Found 38 curated entries in PaperBLAST's database that match '2.3.3.13' as complete word(s).

These curated entries have 31 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Thermus aquaticus YT-1, or try another query

BVI061214_RS07985 BVI061214_01554 WP_053768623.1: 2-isopropylmalate synthase is similar to:	PaperBLAST
Q72JC9: 2-isopropylmalate synthase (EC 2.3.3.13) from Thermus thermophilus	92% id, 100% cov
LEU11_LEPIN / Q8F445: 2-isopropylmalate synthase 1; Alpha-IPM synthase 1; Alpha-isopropylmalate synthase 1; EC 2.3.3.13 from Leptospira interrogans	51% id, 100% cov
CA265_RS15855: 2-isopropylmalate synthase (EC 2.3.3.13) from Pedobacter sp.	49% id, 98% cov
Echvi_3833: 2-isopropylmalate synthase (EC 2.3.3.13) from Echinicola vietnamensis	49% id, 99% cov
LEU1_NEIMB / Q9JZG1: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Neisseria meningitidis Q9JZG1: 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis	48% id, 98% cov
BT1861: 2-isopropylmalate synthase (EC 2.3.3.13) from Bacteroides thetaiotaomicron	44% id, 100% cov
LeuA / b0074: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli leuA / P09151: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli	46% id, 95% cov
LEU1_SALTY / P15875: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Salmonella typhimurium	46% id, 95% cov
LEU1_SULAC / Q4JA78: 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 from Sulfolobus acidocaldarius	45% id, 96% cov
K4CJ56: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	46% id, 89% cov
K4C627: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	47% id, 86% cov
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	42% id, 95% cov
A0A0G2T6D7: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum pennellii	47% id, 85% cov
LEU1_SOYBN / Q39891: Probable 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; Late nodulin-56; N-56; EC 2.3.3.13 from Glycine max	43% id, 93% cov
LEU11_ARATH / Q9LPR4: 2-isopropylmalate synthase 1, chloroplastic; Methylthioalkylmalate synthase-like 4; EC 2.3.3.13 from Arabidopsis thaliana Q9LPR4: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	45% id, 86% cov
Q2QXY9: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	45% id, 86% cov
Q2RAP8: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	45% id, 86% cov
LEU12_ARATH / Q9C550: 2-isopropylmalate synthase 2, chloroplastic; 2-isopropylmalate synthase 1; Methylthioalkylmalate synthase-like 3; EC 2.3.3.13 from Arabidopsis thaliana Q9C550: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	47% id, 83% cov
Q30DX9: 2-isopropylmalate synthase (EC 2.3.3.13) from Brassica insularis	46% id, 84% cov
Q9FG67: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	46% id, 83% cov
Q9FN52: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	46% id, 83% cov
B0SN40: 2-isopropylmalate synthase (EC 2.3.3.13) from Leptospira biflexa	35% id, 99% cov
LEU12_LEPIN / Q8F8T4: 2-isopropylmalate synthase 2; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; EC 2.3.3.13 from Leptospira interrogans	35% id, 89% cov
LEU1_YEAST / P06208: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Saccharomyces cerevisiae	26% id, 89% cov
HTYA_ASPRU / K0E4E5: Isopropyl malate synthase htyA; L-homotyrosine biosynthetic cluster protein A; EC 2.3.3.13 from Aspergillus rugulosus	26% id, 85% cov
LEU9_YEAST / Q12166: 2-isopropylmalate synthase 2, mitochondrial; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; Alpha-isopropylmalate synthase II; EC 2.3.3.13 from Saccharomyces cerevisiae	25% id, 87% cov
LEU1_MYCTO / P9WQB2: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis LEU1_MYCTU / P9WQB3: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis P9WQB3: 2-isopropylmalate synthase (EC 2.3.3.13) from Mycobacterium tuberculosis	25% id, 76% cov
GLOH_GLAL2 / S3D9F8: Isopropyl malate synthase gloH; L-homotyrosine biosynthesis sub-cluster protein gloH; Pneumocandin biosynthesis cluster protein H; EC 2.3.3.13 from Glarea lozoyensis	27% id, 55% cov
AMT7_ALTAL / C9K7B8: Isopropyl malate synthase AMT7; AM-toxin biosynthesis protein 7; EC 2.3.3.13 from Alternaria alternata	24% id, 55% cov
LEU1_CORGL / P42455: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Corynebacterium glutamicum	25% id, 50% cov
More...

cimA BVI061214_RS07990 BVI061214_01555 WP_053767939.1: citramalate synthase is similar to:	PaperBLAST
LEU1_SULAC / Q4JA78: 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 from Sulfolobus acidocaldarius	34% id, 94% cov
Echvi_3833: 2-isopropylmalate synthase (EC 2.3.3.13) from Echinicola vietnamensis	31% id, 99% cov
Q72JC9: 2-isopropylmalate synthase (EC 2.3.3.13) from Thermus thermophilus	32% id, 94% cov
LEU11_LEPIN / Q8F445: 2-isopropylmalate synthase 1; Alpha-IPM synthase 1; Alpha-isopropylmalate synthase 1; EC 2.3.3.13 from Leptospira interrogans	30% id, 97% cov
LeuA / b0074: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli leuA / P09151: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli	30% id, 94% cov
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	30% id, 94% cov
CA265_RS15855: 2-isopropylmalate synthase (EC 2.3.3.13) from Pedobacter sp.	31% id, 90% cov
LEU1_SALTY / P15875: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Salmonella typhimurium	30% id, 94% cov
K4CJ56: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	31% id, 84% cov
A0A0G2T6D7: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum pennellii	31% id, 83% cov
B0SN40: 2-isopropylmalate synthase (EC 2.3.3.13) from Leptospira biflexa	25% id, 98% cov
LEU1_SOYBN / Q39891: Probable 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; Late nodulin-56; N-56; EC 2.3.3.13 from Glycine max	28% id, 87% cov
K4C627: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	28% id, 84% cov
Q9FN52: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	30% id, 79% cov
Q30DX9: 2-isopropylmalate synthase (EC 2.3.3.13) from Brassica insularis	28% id, 83% cov
LEU11_ARATH / Q9LPR4: 2-isopropylmalate synthase 1, chloroplastic; Methylthioalkylmalate synthase-like 4; EC 2.3.3.13 from Arabidopsis thaliana Q9LPR4: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	28% id, 82% cov
LEU12_ARATH / Q9C550: 2-isopropylmalate synthase 2, chloroplastic; 2-isopropylmalate synthase 1; Methylthioalkylmalate synthase-like 3; EC 2.3.3.13 from Arabidopsis thaliana Q9C550: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	28% id, 82% cov
LEU12_LEPIN / Q8F8T4: 2-isopropylmalate synthase 2; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; EC 2.3.3.13 from Leptospira interrogans	26% id, 85% cov
Q9FG67: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	31% id, 72% cov
BT1861: 2-isopropylmalate synthase (EC 2.3.3.13) from Bacteroides thetaiotaomicron	28% id, 78% cov
Q2QXY9: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	27% id, 81% cov
Q2RAP8: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	27% id, 81% cov
LEU1_MYCTO / P9WQB2: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis LEU1_MYCTU / P9WQB3: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis P9WQB3: 2-isopropylmalate synthase (EC 2.3.3.13) from Mycobacterium tuberculosis	24% id, 56% cov
GLOH_GLAL2 / S3D9F8: Isopropyl malate synthase gloH; L-homotyrosine biosynthesis sub-cluster protein gloH; Pneumocandin biosynthesis cluster protein H; EC 2.3.3.13 from Glarea lozoyensis	26% id, 51% cov
LEU1_YEAST / P06208: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Saccharomyces cerevisiae	24% id, 52% cov
LEU1_NEIMB / Q9JZG1: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Neisseria meningitidis Q9JZG1: 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis	31% id, 41% cov
AMT7_ALTAL / C9K7B8: Isopropyl malate synthase AMT7; AM-toxin biosynthesis protein 7; EC 2.3.3.13 from Alternaria alternata	34% id, 22% cov
LEU9_YEAST / Q12166: 2-isopropylmalate synthase 2, mitochondrial; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; Alpha-isopropylmalate synthase II; EC 2.3.3.13 from Saccharomyces cerevisiae	33% id, 19% cov
HTYA_ASPRU / K0E4E5: Isopropyl malate synthase htyA; L-homotyrosine biosynthetic cluster protein A; EC 2.3.3.13 from Aspergillus rugulosus	32% id, 18% cov
LEU1_CORGL / P42455: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Corynebacterium glutamicum	28% id, 18% cov
LEU1_NEIMB / Q9JZG1: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Neisseria meningitidis Q9JZG1: 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis	42% id, 10% cov
More...

lysS BVI061214_RS04165 BVI061214_00784 WP_053767403.1: homocitrate synthase is similar to:	PaperBLAST
Echvi_3833: 2-isopropylmalate synthase (EC 2.3.3.13) from Echinicola vietnamensis	31% id, 97% cov
LEU1_SULAC / Q4JA78: 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 from Sulfolobus acidocaldarius	33% id, 92% cov
CA265_RS15855: 2-isopropylmalate synthase (EC 2.3.3.13) from Pedobacter sp.	29% id, 96% cov
K4CJ56: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	29% id, 87% cov
B0SN40: 2-isopropylmalate synthase (EC 2.3.3.13) from Leptospira biflexa	25% id, 98% cov
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	33% id, 71% cov
Q72JC9: 2-isopropylmalate synthase (EC 2.3.3.13) from Thermus thermophilus	31% id, 73% cov
Q9FN52: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	28% id, 77% cov
LEU11_LEPIN / Q8F445: 2-isopropylmalate synthase 1; Alpha-IPM synthase 1; Alpha-isopropylmalate synthase 1; EC 2.3.3.13 from Leptospira interrogans	29% id, 74% cov
BT1861: 2-isopropylmalate synthase (EC 2.3.3.13) from Bacteroides thetaiotaomicron	30% id, 72% cov
Q9FG67: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	27% id, 79% cov
LEU1_SALTY / P15875: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Salmonella typhimurium	29% id, 71% cov
LEU1_NEIMB / Q9JZG1: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Neisseria meningitidis Q9JZG1: 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis	28% id, 71% cov
LeuA / b0074: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli leuA / P09151: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli	28% id, 71% cov
K4C627: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	27% id, 64% cov
Q30DX9: 2-isopropylmalate synthase (EC 2.3.3.13) from Brassica insularis	28% id, 60% cov
Q2QXY9: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	27% id, 62% cov
Q2RAP8: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	27% id, 62% cov
LEU11_ARATH / Q9LPR4: 2-isopropylmalate synthase 1, chloroplastic; Methylthioalkylmalate synthase-like 4; EC 2.3.3.13 from Arabidopsis thaliana Q9LPR4: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	27% id, 59% cov
LEU12_ARATH / Q9C550: 2-isopropylmalate synthase 2, chloroplastic; 2-isopropylmalate synthase 1; Methylthioalkylmalate synthase-like 3; EC 2.3.3.13 from Arabidopsis thaliana Q9C550: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	27% id, 59% cov
LEU9_YEAST / Q12166: 2-isopropylmalate synthase 2, mitochondrial; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; Alpha-isopropylmalate synthase II; EC 2.3.3.13 from Saccharomyces cerevisiae	27% id, 52% cov
LEU1_YEAST / P06208: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Saccharomyces cerevisiae	26% id, 50% cov
A0A0G2T6D7: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum pennellii	22% id, 53% cov
LEU1_SOYBN / Q39891: Probable 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; Late nodulin-56; N-56; EC 2.3.3.13 from Glycine max	33% id, 10% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1289313-1290911 (frame +3) on NZ_LHCI01000106.1 Thermus aquaticus strain YT-1 jcf7180000008185, whole genome shotgun sequence is similar to:	PaperBLAST
LEU1_SULAC / Q4JA78: 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 from Sulfolobus acidocaldarius Also see hits to annotated proteins above	34% id, 96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory