Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermus aquaticus YT-1 (GCF_001280255.1)

Found 15 curated entries in PaperBLAST's database that match '2.6.1.81' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Thermus aquaticus YT-1, or try another query

BVI061214_RS04805 BVI061214_00912 WP_053767489.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

43% id,
95% cov

ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa
O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa

42% id,
95% cov

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

42% id,
95% cov

More...

BVI061214_RS10655 BVI061214_02105 WP_053768359.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

Echvi_3848: N-succinylornithine aminotransferase (EC 2.6.1.81) from Echinicola vietnamensis

38% id,
96% cov

ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa
O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa

37% id,
97% cov

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

38% id,
94% cov

More...

BVI061214_RS10150 BVI061214_01997 WP_053768287.1: acetyl ornithine aminotransferase family protein
is similar to:
PaperBLAST

ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium

36% id,
96% cov

BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis

36% id,
96% cov

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

36% id,
96% cov

More...

BVI061214_RS09220 BVI061214_01810 WP_053768137.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium

33% id,
97% cov

A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli

33% id,
94% cov

ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli
AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli
astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli
astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli

33% id,
94% cov

More...

hemL BVI061214_RS08935 BVI061214_01745 WP_053768090.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

Echvi_3848: N-succinylornithine aminotransferase (EC 2.6.1.81) from Echinicola vietnamensis

30% id,
87% cov

BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron

29% id,
88% cov

BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis

31% id,
77% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory