Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermus aquaticus YT-1 (GCF_001280255.1)

Found 33 curated entries in PaperBLAST's database that match '4.2.1.51' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Thermus aquaticus YT-1, or try another query

pheA BVI061214_RS11665 BVI061214_02312 WP_053768505.1: prephenate dehydratase
is similar to:
PaperBLAST

PHEA_METJA / Q58054: Prephenate dehydratase; PDT; MjPDT; EC 4.2.1.51 from Methanocaldococcus jannaschii

39% id,
96% cov

Q6Z3Y3: prephenate dehydratase (EC 4.2.1.51) from Oryza sativa

47% id,
78% cov

Echvi_0123: prephenate and/or arogenate dehydratase (EC 4.2.1.51) from Echinicola vietnamensis

35% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory