Curated BLAST for Genomes

 

Curated BLAST

Searching in Amantichitinum ursilacus IGB-41 (GCF_001294205.1)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.58' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Amantichitinum ursilacus IGB-41, or try another query

WG78_RS01025 WG78_01040 WP_053935922.1: tagaturonate reductase
is similar to:
PaperBLAST

UxaB / b1521: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli
uxaB / P0A6L7: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli

54% id,
100% cov

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

38% id,
96% cov

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

33% id,
94% cov

WG78_RS15635 WG78_15775 WP_053938776.1: mannitol dehydrogenase family protein
is similar to:
PaperBLAST

UxaB / b1521: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli
uxaB / P0A6L7: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli

25% id,
91% cov

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

28% id,
80% cov

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

24% id,
82% cov

WG78_RS09690 WG78_09790 WP_053937609.1: mannitol dehydrogenase family protein
is similar to:
PaperBLAST

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

25% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory