Curated BLAST for Genomes

 

Curated BLAST

Searching in Amantichitinum ursilacus IGB-41 (GCF_001294205.1)

Found 3 curated entries in PaperBLAST's database that match '1.14.13.33' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Amantichitinum ursilacus IGB-41, or try another query

WG78_RS05840 WG78_05870 WP_053936853.1: FAD-dependent monooxygenase
is similar to:
PaperBLAST

PHHA_ASPNC / A2QGH7: p-hydroxybenzoate-m-hydroxylase A; 4-hydroxybenzoate-3-monooxygenase phhA; FAD-dependent monooxygenase phhA; EC 1.14.13.33 from Aspergillus niger

28% id,
64% cov

PHHA_EMENI / C8VBV0: p-hydroxybenzoate-m-hydroxylase; 4-hydroxybenzoate-3-monooxygenase phhA; FAD-dependent monooxygenase phhA; EC 1.14.13.33 from Emericella nidulans

29% id,
56% cov

PRAI_PAESP / C4TP09: 4-hydroxybenzoate 3-monooxygenase (NAD(P)H); 4-hydroxybenzoate 3-hydroxylase; 4HB 3-hydroxylase; EC 1.14.13.33 from Paenibacillus sp.

34% id,
18% cov

WG78_RS03310 WG78_03340 WP_053936358.1: FAD-dependent monooxygenase
is similar to:
PaperBLAST

PHHA_ASPNC / A2QGH7: p-hydroxybenzoate-m-hydroxylase A; 4-hydroxybenzoate-3-monooxygenase phhA; FAD-dependent monooxygenase phhA; EC 1.14.13.33 from Aspergillus niger

32% id,
25% cov

PRAI_PAESP / C4TP09: 4-hydroxybenzoate 3-monooxygenase (NAD(P)H); 4-hydroxybenzoate 3-hydroxylase; 4HB 3-hydroxylase; EC 1.14.13.33 from Paenibacillus sp.

42% id,
14% cov

PHHA_EMENI / C8VBV0: p-hydroxybenzoate-m-hydroxylase; 4-hydroxybenzoate-3-monooxygenase phhA; FAD-dependent monooxygenase phhA; EC 1.14.13.33 from Emericella nidulans

43% id,
11% cov

WG78_RS13300 WG78_13395 WP_053938566.1: FAD-dependent monooxygenase
is similar to:
PaperBLAST

PHHA_ASPNC / A2QGH7: p-hydroxybenzoate-m-hydroxylase A; 4-hydroxybenzoate-3-monooxygenase phhA; FAD-dependent monooxygenase phhA; EC 1.14.13.33 from Aspergillus niger

35% id,
19% cov

PRAI_PAESP / C4TP09: 4-hydroxybenzoate 3-monooxygenase (NAD(P)H); 4-hydroxybenzoate 3-hydroxylase; 4HB 3-hydroxylase; EC 1.14.13.33 from Paenibacillus sp.

47% id,
12% cov

PHHA_EMENI / C8VBV0: p-hydroxybenzoate-m-hydroxylase; 4-hydroxybenzoate-3-monooxygenase phhA; FAD-dependent monooxygenase phhA; EC 1.14.13.33 from Emericella nidulans

39% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

227289-228842 (frame -2) on NZ_LAQT01000003.1 Amantichitinum ursilacus strain IGB-41 contig03, whole genome shotgun sequence
is similar to:
PaperBLAST

PHHA_ASPNC / A2QGH7: p-hydroxybenzoate-m-hydroxylase A; 4-hydroxybenzoate-3-monooxygenase phhA; FAD-dependent monooxygenase phhA; EC 1.14.13.33 from Aspergillus niger
Also see hits to annotated proteins above

28% id,
65% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory