Curated BLAST for Genomes

 

Curated BLAST

Searching in Paenacidovorax caeni R-24608 (GCF_001298675.1)

Found 28 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Paenacidovorax caeni R-24608, or try another query

BN2503_RS06835 WP_054255904.1: bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
is similar to:
PaperBLAST

CH_090885: phosphate acetyltransferase; EC 2.3.1.8 from Thermotoga maritima

38% id,
97% cov

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

25% id,
96% cov

PTAS_METTE / P38503: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Methanosarcina thermophila

24% id,
97% cov

More...

BN2503_RS05220 WP_054255580.1: NADP-dependent malic enzyme
is similar to:
PaperBLAST

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

32% id,
98% cov

Q5LMK3: phosphate acetyltransferase (EC 2.3.1.8) from Ruegeria pomeroyi

31% id,
99% cov

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum

31% id,
96% cov

More...

BN2503_RS03565 WP_054255256.1: NADP-dependent malic enzyme
is similar to:
PaperBLAST

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum

32% id,
95% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

31% id,
100% cov

Q5LMK3: phosphate acetyltransferase (EC 2.3.1.8) from Ruegeria pomeroyi

30% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory