Curated BLAST for Genomes

 

Curated BLAST

Searching in Paenacidovorax caeni R-24608 (GCF_001298675.1)

Found 8 curated entries in PaperBLAST's database that match '3.5.1.30' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Paenacidovorax caeni R-24608, or try another query

BN2503_RS02945 WP_054255152.1: carbon-nitrogen hydrolase family protein
is similar to:
PaperBLAST

davA / Q88QV2: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida
Q88QV2: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida

32% id,
95% cov

B3IVI7: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida

32% id,
95% cov

PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

33% id,
91% cov

More...

BN2503_RS06240 WP_054255785.1: NAD+ synthase
is similar to:
PaperBLAST

B3IVI7: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida

34% id,
86% cov

davA / Q88QV2: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida
Q88QV2: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida

34% id,
86% cov

Pf1N1B4_2504: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

33% id,
83% cov

More...

BN2503_RS01565 WP_054254879.1: aliphatic amidase
is similar to:
PaperBLAST

Pf1N1B4_2504: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

29% id,
92% cov

PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

28% id,
92% cov

AO353_07425: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

26% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory