Curated BLAST for Genomes

 

Curated BLAST

Searching in Paenacidovorax caeni R-24608 (GCF_001298675.1)

Found 3 curated entries in PaperBLAST's database that match '4.2.1.100' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Paenacidovorax caeni R-24608, or try another query

BN2503_RS05070 WP_054255554.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus

34% id,
97% cov

O87873: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Thauera aromatica

30% id,
92% cov

BN2503_RS01750 WP_054254926.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

bamR / Q2LXU6: cyclohexa-1,5-dienecarbonyl-CoA hydratase monomer (EC 4.2.1.100) from Syntrophus aciditrophicus

31% id,
94% cov

D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus

28% id,
98% cov

BN2503_RS04075 WP_175537933.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus

27% id,
98% cov

O87873: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Thauera aromatica

27% id,
93% cov

BN2503_RS13035 WP_054257095.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

O87873: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Thauera aromatica

27% id,
95% cov

BN2503_RS12300 WP_054256955.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

bamR / Q2LXU6: cyclohexa-1,5-dienecarbonyl-CoA hydratase monomer (EC 4.2.1.100) from Syntrophus aciditrophicus

26% id,
98% cov

D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus

24% id,
98% cov

BN2503_RS10715 WP_054256652.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus

29% id,
87% cov

BN2503_RS06985 WP_054255932.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

bamR / Q2LXU6: cyclohexa-1,5-dienecarbonyl-CoA hydratase monomer (EC 4.2.1.100) from Syntrophus aciditrophicus

25% id,
93% cov

BN2503_RS12155 WP_054256926.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:
PaperBLAST

D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus

36% id,
60% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory