Curated BLAST for Genomes

 

Curated BLAST

Searching in Neptunomonas antarctica S3-22 (GCF_001305295.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Neptunomonas antarctica S3-22, or try another query

Nant_RS08090 WP_054341138.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

44% id,
99% cov

Nant_RS12790 WP_054342057.1: carbohydrate kinase
is similar to:
PaperBLAST

ABZR86_RS11105: Fructokinase (EC 2.7.1.4) from Dyella japonica

44% id,
97% cov

Sama_0561: Fructokinase (EC 2.7.1.4) from Shewanella amazonensis

43% id,
90% cov

Shewana3_0069: Fructokinase (EC 2.7.1.4) from Shewanella sp.

39% id,
98% cov

More...

paaG Nant_RS07345 WP_054341000.1: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

30% id,
98% cov

Nant_RS13960 WP_054342283.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

29% id,
98% cov

paaF Nant_RS07340 WP_054340999.1: 2,3-dehydroadipyl-CoA hydratase PaaF
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

29% id,
98% cov

Nant_RS10130 WP_054341532.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

29% id,
97% cov

Nant_RS07470 WP_054341025.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

25% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory