Curated BLAST for Genomes

 

Curated BLAST

Searching in Neptunomonas antarctica S3-22 (GCF_001305295.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Neptunomonas antarctica S3-22, or try another query

purT Nant_RS12275 WP_054341956.1: formate-dependent phosphoribosylglycinamide formyltransferase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli

64% id,
99% cov

Nant_RS06470 WP_054340820.1: acetate/propionate family kinase
is similar to:
PaperBLAST

ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis

38% id,
99% cov

G4T0C7: acetate kinase (EC 2.7.2.1) from Methylotuvimicrobium alcaliphilum

39% id,
97% cov

A2RNG4: acetate kinase (EC 2.7.2.1) from Lactococcus lactis

37% id,
99% cov

More...

Nant_RS03120 WP_274378312.1: cupin domain-containing protein
is similar to:
PaperBLAST

EUTQ_SALTY / Q9ZFV5: Acetate kinase EutQ; Ethanolamine utilization protein EutQ; EC 2.7.2.1 from Salmonella typhimurium

32% id,
51% cov

EUTQ_CLOD6 / Q187N7: Acetate kinase EutQ; Ethanolamine utilization protein EutQ; EC 2.7.2.1 from Clostridioides difficile

32% id,
50% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory