Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum thiophilum BV-S (GCF_001305595.1)

Found 11 curated entries in PaperBLAST's database that match '5.1.99.1' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azospirillum thiophilum BV-S, or try another query

mce AL072_RS08275 AL072_08270 WP_045580738.1: methylmalonyl-CoA epimerase
is similar to:
PaperBLAST

EPI_CERS4 / Q3IZP4: Ethylmalonyl-CoA/methylmalonyl-CoA epimerase; EC 5.1.99.-; EC 5.1.99.1 from Cereibacter sphaeroides

80% id,
100% cov

MCEE_HUMAN / Q96PE7: Methylmalonyl-CoA epimerase, mitochondrial; DL-methylmalonyl-CoA racemase; EC 5.1.99.1 from Homo sapiens
MCEE / Q96PE7: methylmalonyl CoA epimerase (EC 5.1.99.1) from Homo sapiens

64% id,
75% cov

AL072_RS14955 AL072_14950 WP_045586149.1: VOC family protein
is similar to:
PaperBLAST

Q8RCQ6: methylmalonyl-CoA epimerase (EC 5.1.99.1) from Caldanaerobacter subterraneus

32% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory