Curated BLAST
Searching in Aquimarina longa SW024 (GCF_001401755.1)
Found 52 curated entries in PaperBLAST's database that match '1.5.5.2' as complete word(s).
These curated entries have 43 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Aquimarina longa SW024, or try another query
N456_RS13080 WP_062057831.1: proline dehydrogenase family protein is similar to: | PaperBLAST |
CA265_RS11605: Proline dehydrogenase (EC 1.5.5.2) from Pedobacter sp. | 48% id, 98% cov |
Echvi_0119: Proline dehydrogenase (EC 1.5.5.2) from Echinicola vietnamensis | 45% id, 96% cov |
PROD2_ARATH / Q6NKX1: Proline dehydrogenase 2, mitochondrial; Osmotic stress-induced proline dehydrogenase; Proline oxidase; EC 1.5.5.2 from Arabidopsis thaliana POX2 / Q6NKX1: proline dehydrogenase 2 (EC 1.5.5.2) from Arabidopsis thaliana | 34% id, 61% cov |
PROD1_ARATH / P92983: Proline dehydrogenase 1, mitochondrial; Osmotic stress-induced proline dehydrogenase; Proline oxidase; Protein EARLY RESPONSIVE TO DEHYDRATION 5; EC 1.5.5.2 from Arabidopsis thaliana POX1 / P92983: proline dehydrogenase 1 (EC 1.5.5.2) from Arabidopsis thaliana P92983: proline dehydrogenase (EC 1.5.5.2) from Arabidopsis thaliana | 32% id, 59% cov |
PROD_HUMAN / O43272: Proline dehydrogenase 1, mitochondrial; Proline oxidase; Proline oxidase 2; p53-induced gene 6 protein; EC 1.5.5.2 from Homo sapiens | 36% id, 53% cov |
HYPDH_HUMAN / Q9UF12: Hydroxyproline dehydrogenase; HYPDH; Kidney and liver proline oxidase 1; HsPOX1; Probable proline dehydrogenase 2; Probable proline oxidase 2; EC 1.5.5.3; EC 1.5.5.2 from Homo sapiens | 35% id, 54% cov |
HYPDH_MOUSE / Q8VCZ9: Hydroxyproline dehydrogenase; HYPDH; Kidney and liver proline oxidase 1; MmPOX1; Probable proline dehydrogenase 2; Probable proline oxidase 2; Proline oxidase-like protein; PO; Proline oxidase; EC 1.5.5.3; EC 1.5.5.2 from Mus musculus | 34% id, 55% cov |
PRODH / O43272: mitochondrial proline dehydrogenase 1 (EC 1.5.5.2) from Homo sapiens O43272: proline dehydrogenase (EC 1.5.5.2) from Homo sapiens | 36% id, 53% cov |
V9XZ65: proline dehydrogenase (EC 1.5.5.2) from Jatropha curcas | 35% id, 50% cov |
Q9WU79: proline dehydrogenase (EC 1.5.5.2) from Mus musculus | 37% id, 47% cov |
Q4CVA1: proline dehydrogenase (EC 1.5.5.2) from Trypanosoma cruzi | 31% id, 52% cov |
PROD_CAEEL / O45228: Proline dehydrogenase 1, mitochondrial; Proline oxidase; EC 1.5.5.2 from Caenorhabditis elegans | 37% id, 40% cov |
PROD_DROME / Q04499: Proline dehydrogenase 1, mitochondrial; Proline oxidase; Protein sluggish-A; EC 1.5.5.2 from Drosophila melanogaster | 37% id, 40% cov |
More... |
N456_RS01240 WP_062053068.1: aldehyde dehydrogenase is similar to: | PaperBLAST |
SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis | 29% id, 44% cov |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 28% id, 44% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 30% id, 41% cov |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 27% id, 43% cov |
HP15_2688: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Marinobacter adhaerens | 30% id, 36% cov |
PGA1_c11750: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Phaeobacter inhibens | 29% id, 35% cov |
HSERO_RS00905: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Herbaspirillum seropedicae | 27% id, 35% cov |
AO353_12810: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas fluorescens | 28% id, 33% cov |
AZOBR_RS23695: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Azospirillum brasilense | 27% id, 35% cov |
putA / Q88D80: proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Pseudomonas putida | 28% id, 33% cov |
BWI76_RS10795: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Klebsiella michiganensis | 27% id, 33% cov |
Ac3H11_2850: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Acidovorax sp. | 26% id, 34% cov |
RR42_RS20125: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Cupriavidus basilensis | 27% id, 33% cov |
PUTA_ECOLI / P09546: Bifunctional protein PutA; EC 1.5.5.2; EC 1.2.1.88 from Escherichia coli PutA / B1014: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli PutA / P09546: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli P09546: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); proline dehydrogenase (EC 1.5.5.2) from Escherichia coli | 27% id, 33% cov |
putA / P10503: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate γ-semialdehyde dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Salmonella typhimurium | 26% id, 32% cov |
More... |
pruA N456_RS22400 WP_062062443.1: L-glutamate gamma-semialdehyde dehydrogenase is similar to: | PaperBLAST |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 28% id, 46% cov |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 28% id, 44% cov |
SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis | 28% id, 44% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 28% id, 44% cov |
AZOBR_RS23695: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Azospirillum brasilense | 28% id, 41% cov |
Ac3H11_2850: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Acidovorax sp. | 28% id, 40% cov |
RR42_RS20125: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Cupriavidus basilensis | 29% id, 36% cov |
AO353_12810: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas fluorescens | 31% id, 35% cov |
HSERO_RS00905: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Herbaspirillum seropedicae | 28% id, 37% cov |
PUTA_ECOLI / P09546: Bifunctional protein PutA; EC 1.5.5.2; EC 1.2.1.88 from Escherichia coli PutA / B1014: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli PutA / P09546: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli P09546: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); proline dehydrogenase (EC 1.5.5.2) from Escherichia coli | 28% id, 38% cov |
putA / P10503: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate γ-semialdehyde dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Salmonella typhimurium | 29% id, 36% cov |
HP15_2688: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Marinobacter adhaerens | 27% id, 38% cov |
BWI76_RS10795: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Klebsiella michiganensis | 29% id, 35% cov |
putA / Q88D80: proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Pseudomonas putida | 29% id, 34% cov |
PGA1_c11750: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Phaeobacter inhibens | 27% id, 36% cov |
More... |
N456_RS08060 WP_062055749.1: aldehyde dehydrogenase family protein is similar to: | PaperBLAST |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 27% id, 46% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 28% id, 43% cov |
SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis | 28% id, 44% cov |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 28% id, 43% cov |
Ac3H11_2850: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Acidovorax sp. | 30% id, 35% cov |
PGA1_c11750: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Phaeobacter inhibens | 28% id, 37% cov |
HSERO_RS00905: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Herbaspirillum seropedicae | 28% id, 37% cov |
AO353_12810: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas fluorescens | 29% id, 35% cov |
BWI76_RS10795: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Klebsiella michiganensis | 28% id, 36% cov |
AZOBR_RS23695: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Azospirillum brasilense | 27% id, 36% cov |
putA / Q88D80: proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Pseudomonas putida | 29% id, 34% cov |
RR42_RS20125: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Cupriavidus basilensis | 29% id, 33% cov |
HP15_2688: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Marinobacter adhaerens | 27% id, 36% cov |
putA / P10503: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate γ-semialdehyde dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Salmonella typhimurium | 28% id, 35% cov |
PUTA_ECOLI / P09546: Bifunctional protein PutA; EC 1.5.5.2; EC 1.2.1.88 from Escherichia coli PutA / B1014: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli PutA / P09546: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli P09546: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); proline dehydrogenase (EC 1.5.5.2) from Escherichia coli | 28% id, 34% cov |
More... |
N456_RS05125 WP_062054604.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
Q8U1G2: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus | 26% id, 47% cov |
O59445: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii | 44% id, 10% cov |
Q8U022: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus | 44% id, 10% cov |
Q5JFG7: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis | 39% id, 11% cov |
Q8U1G2: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus | 37% id, 11% cov |
O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii | 37% id, 11% cov |
More... |
paaZ N456_RS00470 WP_062052752.1: phenylacetic acid degradation bifunctional protein PaaZ is similar to: | PaperBLAST |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 23% id, 40% cov |
N456_RS01325 WP_062053102.1: aldehyde dehydrogenase is similar to: | PaperBLAST |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 24% id, 33% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 24% id, 33% cov |
SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis | 24% id, 33% cov |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 24% id, 32% cov |
HP15_2688: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Marinobacter adhaerens | 25% id, 27% cov |
RR42_RS20125: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Cupriavidus basilensis | 24% id, 25% cov |
BWI76_RS10795: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Klebsiella michiganensis | 23% id, 25% cov |
PUTA_ECOLI / P09546: Bifunctional protein PutA; EC 1.5.5.2; EC 1.2.1.88 from Escherichia coli PutA / B1014: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli PutA / P09546: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli P09546: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); proline dehydrogenase (EC 1.5.5.2) from Escherichia coli | 27% id, 13% cov |
putA / P10503: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate γ-semialdehyde dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Salmonella typhimurium | 26% id, 13% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory