Curated BLAST for Genomes

 

Curated BLAST

Searching in Aquimarina longa SW024 (GCF_001401755.1)

Found 37 curated entries in PaperBLAST's database that match '3.5.99.6' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Aquimarina longa SW024, or try another query

nagB N456_RS19760 WP_062061000.1: glucosamine-6-phosphate deaminase
is similar to:
PaperBLAST

CA265_RS21925: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Pedobacter sp.

59% id,
99% cov

GAMA_BACSU / O31458: Glucosamine-6-phosphate deaminase 2; GlcN6P deaminase 2; GNPDA 2; Glucosamine-6-phosphate isomerase 2; EC 3.5.99.6 from Bacillus subtilis

46% id,
91% cov

NAGB_BACSU / O35000: Glucosamine-6-phosphate deaminase 1; GlcN6P deaminase 1; GNPDA 1; Glucosamine-6-phosphate isomerase 1; EC 3.5.99.6 from Bacillus subtilis
O35000: glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Bacillus subtilis

44% id,
94% cov

More...

glmS N456_RS03480 WP_062053929.1: glutamine--fructose-6-phosphate transaminase (isomerizing)
is similar to:
PaperBLAST

PGA1_c27890: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Phaeobacter inhibens

28% id,
97% cov

SO3506: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella oneidensis

27% id,
95% cov

CCNA_00453: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Caulobacter crescentus

30% id,
84% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory