Curated BLAST for Genomes

 

Curated BLAST

Searching in Aquimarina longa SW024 (GCF_001401755.1)

Found 21 curated entries in PaperBLAST's database that match '6.3.4.5' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Aquimarina longa SW024, or try another query

N456_RS18115 WP_062060233.1: argininosuccinate synthase domain-containing protein
is similar to:
PaperBLAST

BT3760: arginosuccinate synthetase (EC 6.3.4.5) from Bacteroides thetaiotaomicron

55% id,
99% cov

N515DRAFT_3766: arginosuccinate synthetase (EC 6.3.4.5) from Dyella japonica

32% id,
99% cov

A4I066: argininosuccinate synthase (EC 6.3.4.5) from Leishmania infantum

31% id,
92% cov

More...

mnmA N456_RS16230 WP_062059534.1: tRNA 2-thiouridine(34) synthase MnmA
is similar to:
PaperBLAST

S4V5K7: argininosuccinate synthase (EC 6.3.4.5) from Protopterus annectens

28% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory