Searching in Roseburia faecis M72 (GCF_001406815.1)
Found 39 curated entries in PaperBLAST's database that match '1.1.1.3' as complete word(s).
These curated entries have 30 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Roseburia faecis M72, or try another query
| M72_RS01920 M72_01851 WP_055066967.1: homoserine dehydrogenase is similar to: | PaperBLAST |
DHOM_NEIG1 / Q5F8J4: Homoserine dehydrogenase; HDH; HSD; NAD(+)-dependent homoserine dehydrogenase; NAD(+)-dependent HSD; NgHSD; EC 1.1.1.3 from Neisseria gonorrhoeae | 37% id, 95% cov |
DHOM_BACSU / P19582: Homoserine dehydrogenase; HDH; HSD; EC 1.1.1.3 from Bacillus subtilis | 36% id, 93% cov |
DHOM_LACLC / P52985: Homoserine dehydrogenase; HDH; HSD; EC 1.1.1.3 from Lactococcus lactis | 38% id, 84% cov |
| M72_RS09220 M72_29221 WP_055068006.1: aspartate kinase is similar to: | PaperBLAST |
BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron | 31% id, 56% cov |
Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis | 30% id, 56% cov |
CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp. | 29% id, 56% cov |
| proB M72_RS08265 M72_06521 WP_055067872.1: glutamate 5-kinase is similar to: | PaperBLAST |
Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima | 22% id, 31% cov |
ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 36% id, 7% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory