Searching in Roseburia faecis M72 (GCF_001406815.1)
Found 34 curated entries in PaperBLAST's database that match '5.3.1.8' as complete word(s).
These curated entries have 28 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Roseburia faecis M72, or try another query
| M72_RS05525 M72_25681 WP_055067486.1: GH1 family beta-glucosidase is similar to: | PaperBLAST |
MANA1_BACSU / O31646: Mannose-6-phosphate isomerase ManA; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis | 50% id, 98% cov |
A4ITT1: mannose-6-phosphate isomerase (EC 5.3.1.8) from Geobacillus thermodenitrificans | 47% id, 99% cov |
Q9AGZ4: mannose-6-phosphate isomerase (EC 5.3.1.8) from Bacillus subtilis | 44% id, 98% cov |
| glmM M72_RS01885 M72_01781 WP_022085849.1: phosphoglucosamine mutase is similar to: | PaperBLAST |
ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii | 30% id, 99% cov |
| M72_RS01795 M72_01601 WP_055066947.1: phospho-sugar mutase is similar to: | PaperBLAST |
ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii | 24% id, 81% cov |
| M72_RS05460 M72_25551 WP_055067476.1: phospho-sugar mutase is similar to: | PaperBLAST |
ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii | 23% id, 83% cov |
| M72_RS03535 M72_21741 WP_022045288.1: cupin domain-containing protein is similar to: | PaperBLAST |
ALGA_PSEAE / P07874: Alginate biosynthesis protein AlgA; EC 5.3.1.8; EC 2.7.7.13 from Pseudomonas aeruginosa | 26% id, 22% cov |
algA / GI|31296823: alginate biosynthesis protein AlgA; EC 2.7.7.13; EC 5.3.1.8 from Pseudomonas fluorescens | 27% id, 13% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 88483-88845 (frame +1) on NZ_CVRR01000006.1 Roseburia faecis strain M72, whole genome shotgun sequence is similar to: | PaperBLAST |
ALGA_PSEAE / P07874: Alginate biosynthesis protein AlgA; EC 5.3.1.8; EC 2.7.7.13 from Pseudomonas aeruginosa | 21% id, 26% cov |
Lawrence Berkeley National Laboratory