Curated BLAST for Genomes

 

Curated BLAST

Searching in Roseburia faecis M72 (GCF_001406815.1)

Found 21 curated entries in PaperBLAST's database that match '6.3.4.5' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Roseburia faecis M72, or try another query

M72_RS12780 M72_12781 WP_022046408.1: argininosuccinate synthase
is similar to:
PaperBLAST

A4I066: argininosuccinate synthase (EC 6.3.4.5) from Leishmania infantum

62% id,
95% cov

H9BG20: argininosuccinate synthase (EC 6.3.4.5) from Leishmania donovani

62% id,
95% cov

ASSY_THET8 / P59846: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermus thermophilus

51% id,
98% cov

More...

mnmA M72_RS03260 M72_21161 WP_055067163.1: tRNA 2-thiouridine(34) synthase MnmA
is similar to:
PaperBLAST

ARG1: argininosuccinate synthase; EC 6.3.4.5 from Candida albicans

24% id,
56% cov

ASSY_THEMA / Q9X2A1: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermotoga maritima

26% id,
50% cov

ASSY_MOUSE / P16460: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Mus musculus
P16460: argininosuccinate synthase (EC 6.3.4.5) from Mus musculus

31% id,
28% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory