Curated BLAST for Genomes

 

Curated BLAST

Searching in Lacinutrix algicola AKS293 (GCF_001418085.1)

Found 1 curated entries in PaperBLAST's database that match '2.6.1.124' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Lacinutrix algicola AKS293, or try another query

rocD ASC41_RS11700 WP_055436832.1: ornithine--oxo-acid transaminase
is similar to:
PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

34% id,
99% cov

ASC41_RS01645 WP_055434904.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

32% id,
97% cov

ASC41_RS04930 WP_055435532.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

33% id,
96% cov

hemL ASC41_RS00020 WP_055434605.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

29% id,
86% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory