Curated BLAST for Genomes

 

Curated BLAST

Searching in Lacinutrix algicola AKS293 (GCF_001418085.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Lacinutrix algicola AKS293, or try another query

thrA ASC41_RS14495 WP_055437364.1: bifunctional aspartate kinase/homoserine dehydrogenase I
is similar to:
PaperBLAST

Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis

46% id,
100% cov

BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron

45% id,
100% cov

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

38% id,
98% cov

More...

thrA ASC41_RS02630 WP_055435097.1: bifunctional aspartate kinase/homoserine dehydrogenase I
is similar to:
PaperBLAST

BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron

36% id,
100% cov

Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis

36% id,
99% cov

CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp.

34% id,
100% cov

More...

ASC41_RS09190 WP_055436340.1: aspartate kinase
is similar to:
PaperBLAST

AK3_ECOLI / P08660: Lysine-sensitive aspartokinase 3; Aspartate kinase III; AKIII; Lysine-sensitive aspartokinase III; EC 2.7.2.4 from Escherichia coli
Apk / b4024: aspartate kinase III (EC 2.7.2.4) from Escherichia coli
lysC / P08660: aspartate kinase III (EC 2.7.2.4) from Escherichia coli
P08660: aspartate kinase (EC 2.7.2.4) from Escherichia coli

33% id,
99% cov

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

31% id,
99% cov

AK1_ARATH / Q9LYU8: Aspartokinase 1, chloroplastic; Aspartate kinase 1; EC 2.7.2.4 from Arabidopsis thaliana
Q9LYU8: aspartate kinase (EC 2.7.2.4) from Arabidopsis thaliana

36% id,
81% cov

More...

ASC41_RS07585 WP_055436038.1: aspartate kinase
is similar to:
PaperBLAST

AK3_ECOLI / P08660: Lysine-sensitive aspartokinase 3; Aspartate kinase III; AKIII; Lysine-sensitive aspartokinase III; EC 2.7.2.4 from Escherichia coli
Apk / b4024: aspartate kinase III (EC 2.7.2.4) from Escherichia coli
lysC / P08660: aspartate kinase III (EC 2.7.2.4) from Escherichia coli
P08660: aspartate kinase (EC 2.7.2.4) from Escherichia coli

32% id,
86% cov

Q9RUL9: aspartate kinase (EC 2.7.2.4) from Deinococcus radiodurans

27% id,
84% cov

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

28% id,
80% cov

More...

lysA ASC41_RS06840 WP_055435891.1: diaminopimelate decarboxylase
is similar to:
PaperBLAST

ABZR86_RS19560: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

32% id,
42% cov

pyrH ASC41_RS07180 WP_055435956.1: UMP kinase
is similar to:
PaperBLAST

AK2_BACSU / P08495: Aspartokinase 2; Aspartate kinase 2; Aspartokinase II; EC 2.7.2.4 from Bacillus subtilis
lysC / GB|CAA99580.1: aspartate kinase 2; EC 2.7.2.4 from Bacillus subtilis
lysCα / P08495: aspartate kinase II α subunit (EC 2.7.2.4) from Bacillus subtilis
lysCβ / P08495: aspartate kinase II β subunit (EC 2.7.2.4) from Bacillus subtilis
P08495: aspartate kinase (EC 2.7.2.4) from Bacillus subtilis

26% id,
52% cov

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

25% id,
53% cov

AK_PSEFS / C3JXY0: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas fluorescens

25% id,
54% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory