Curated BLAST for Genomes

 

Curated BLAST

Searching in Lacinutrix algicola AKS293 (GCF_001418085.1)

Found 118 curated entries in PaperBLAST's database that match '6.3.1.2' as complete word(s).

These curated entries have 86 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Lacinutrix algicola AKS293, or try another query

ASC41_RS06570 WP_055435842.1: glutamine synthetase beta-grasp domain-containing protein
is similar to:
PaperBLAST

GLNA2_RHILP / Q02154: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase II; GSII; EC 6.3.1.2 from Rhizobium leguminosarum

61% id,
100% cov

glnA: glutamine synthetase; EC 6.3.1.2 from Emericella nidulans

47% id,
96% cov

GLNA2_STRVR / P19432: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase II; GSII; EC 6.3.1.2 from Streptomyces viridochromogenes

46% id,
96% cov

More...

ASC41_RS06575 WP_055435843.1: glutamine synthetase III
is similar to:
PaperBLAST

Q5LGP1: glutamine synthetase (EC 6.3.1.2) from Bacteroides fragilis

58% id,
100% cov

GLNA3_BACFR / P15623: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase III; GSIII; EC 6.3.1.2 from Bacteroides fragilis

58% id,
100% cov

gluN / Q4ZH57: glutamine synthetase subunit (EC 6.3.1.2) from Ruminococcus albus

49% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory