Curated BLAST for Genomes

 

Curated BLAST

Searching in Lacinutrix himadriensis E4-9a (GCF_001418105.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Lacinutrix himadriensis E4-9a, or try another query

AMD28_RS14400 WP_055444836.1: carbohydrate kinase
is similar to:
PaperBLAST

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

41% id,
97% cov

G4T023: fructokinase (EC 2.7.1.4) from Methylotuvimicrobium alcaliphilum

33% id,
94% cov

C4M2I2: fructokinase (EC 2.7.1.4) from Entamoeba histolytica

30% id,
96% cov

More...

AMD28_RS14785 WP_055444901.1: 1-phosphofructokinase family hexose kinase
is similar to:
PaperBLAST

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

22% id,
89% cov

A0A0H3AER7: fructokinase (EC 2.7.1.4) from Vibrio cholerae

30% id,
46% cov

AO356_00035: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

25% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory