Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 37 curated entries in PaperBLAST's database that match '1.1.1.41' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS01900 ABB28_01910 WP_057506985.1: isocitrate dehydrogenase is similar to:	PaperBLAST
IDH3A_HUMAN / P50213: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Homo sapiens P50213: isocitrate dehydrogenase (NAD+) (subunit 2/2) (EC 1.1.1.41) from Homo sapiens	49% id, 91% cov
IDH3A_CAEEL / Q93714: Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Caenorhabditis elegans	47% id, 92% cov
IDH3A_MOUSE / Q9D6R2: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Mus musculus Q9D6R2: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Mus musculus	48% id, 91% cov
IDH3A_BOVIN / P41563: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitrate dehydrogenase subunits 3/4; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Bos taurus	48% id, 91% cov
IDH3A_PIG / P56471: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Sus scrofa	48% id, 91% cov
IDH3A_RAT / Q99NA5: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Rattus norvegicus Q99NA5: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rattus norvegicus	48% id, 91% cov
IDH5_ARATH / Q945K7: Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial; IDH-V; Isocitric dehydrogenase 5; NAD(+)-specific ICDH 5; EC 1.1.1.41 from Arabidopsis thaliana Q945K7: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	49% id, 88% cov
IDH6_ARATH / Q8LG77: Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial; IDH-VI; Isocitric dehydrogenase 6; NAD(+)-specific ICDH 6; EC 1.1.1.41 from Arabidopsis thaliana Q8LG77: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	48% id, 88% cov
idh2 / RF\|NP_595203.1: isocitrate dehydrogenase (NAD+) subunit 2; EC 1.1.1.41 from Schizosaccharomyces pombe	49% id, 87% cov
IDH2_SCHPO / Q9USP8: Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Schizosaccharomyces pombe	49% id, 87% cov
G1APK3: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rhodotorula toruloides	46% id, 89% cov
IDH2_YEAST / P28241: Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Saccharomyces cerevisiae P28241: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Saccharomyces cerevisiae	45% id, 91% cov
Q8LFC0: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	45% id, 90% cov
P93032: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	45% id, 90% cov
O81796: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	44% id, 89% cov
IDH1_SCHPO / O13696: Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Schizosaccharomyces pombe idh1 / RF\|NP_594397.1: isocitrate dehydrogenase (NAD+) subunit 1 Idh1; EC 1.1.1.41 from Schizosaccharomyces pombe	41% id, 93% cov
G1APK2: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rhodotorula toruloides	42% id, 89% cov
Q8U488: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Pyrococcus furiosus	42% id, 88% cov
P51553: isocitrate dehydrogenase (NAD+) (subunit 1/3) (EC 1.1.1.41) from Homo sapiens	44% id, 83% cov
IDH1_YEAST / P28834: Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Saccharomyces cerevisiae P28834: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Saccharomyces cerevisiae	39% id, 91% cov
O43837: isocitrate dehydrogenase (NAD+) (subunit 1/2) (EC 1.1.1.41) from Homo sapiens	39% id, 86% cov
Q8GAX0: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Acidithiobacillus thiooxidans	37% id, 52% cov
Q8GAX0: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Acidithiobacillus thiooxidans	33% id, 53% cov
More...

ABB28_RS10115 ABB28_10145 WP_057508507.1: tartrate dehydrogenase is similar to:	PaperBLAST
IDH2_YEAST / P28241: Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Saccharomyces cerevisiae P28241: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Saccharomyces cerevisiae	33% id, 90% cov
IDH6_ARATH / Q8LG77: Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial; IDH-VI; Isocitric dehydrogenase 6; NAD(+)-specific ICDH 6; EC 1.1.1.41 from Arabidopsis thaliana Q8LG77: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	33% id, 88% cov
G1APK3: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rhodotorula toruloides	33% id, 88% cov
IDH3A_CAEEL / Q93714: Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Caenorhabditis elegans	32% id, 92% cov
IDH5_ARATH / Q945K7: Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial; IDH-V; Isocitric dehydrogenase 5; NAD(+)-specific ICDH 5; EC 1.1.1.41 from Arabidopsis thaliana Q945K7: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	32% id, 89% cov
IDH3A_HUMAN / P50213: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Homo sapiens P50213: isocitrate dehydrogenase (NAD+) (subunit 2/2) (EC 1.1.1.41) from Homo sapiens	31% id, 90% cov
Q8U488: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Pyrococcus furiosus	31% id, 90% cov
IDH3A_PIG / P56471: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Sus scrofa	31% id, 90% cov
IDH3A_RAT / Q99NA5: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Rattus norvegicus Q99NA5: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rattus norvegicus	31% id, 90% cov
IDH1_SCHPO / O13696: Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Schizosaccharomyces pombe idh1 / RF\|NP_594397.1: isocitrate dehydrogenase (NAD+) subunit 1 Idh1; EC 1.1.1.41 from Schizosaccharomyces pombe	30% id, 92% cov
IDH3A_MOUSE / Q9D6R2: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Mus musculus Q9D6R2: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Mus musculus	31% id, 90% cov
IDH3A_BOVIN / P41563: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitrate dehydrogenase subunits 3/4; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Bos taurus	30% id, 90% cov
idh2 / RF\|NP_595203.1: isocitrate dehydrogenase (NAD+) subunit 2; EC 1.1.1.41 from Schizosaccharomyces pombe	30% id, 88% cov
G1APK2: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rhodotorula toruloides	30% id, 88% cov
IDH2_SCHPO / Q9USP8: Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Schizosaccharomyces pombe	30% id, 88% cov
P93032: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	29% id, 89% cov
Q8LFC0: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	29% id, 89% cov
O81796: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	28% id, 89% cov
Q8GAX0: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Acidithiobacillus thiooxidans	25% id, 85% cov
P51553: isocitrate dehydrogenase (NAD+) (subunit 1/3) (EC 1.1.1.41) from Homo sapiens	31% id, 63% cov
More...

leuB ABB28_RS14510 ABB28_14550 WP_057509305.1: 3-isopropylmalate dehydrogenase is similar to:	PaperBLAST
IDH2_YEAST / P28241: Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Saccharomyces cerevisiae P28241: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Saccharomyces cerevisiae	33% id, 90% cov
IDH3A_MOUSE / Q9D6R2: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Mus musculus Q9D6R2: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Mus musculus	33% id, 90% cov
IDH3A_HUMAN / P50213: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Homo sapiens P50213: isocitrate dehydrogenase (NAD+) (subunit 2/2) (EC 1.1.1.41) from Homo sapiens	33% id, 90% cov
IDH3A_BOVIN / P41563: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitrate dehydrogenase subunits 3/4; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Bos taurus	33% id, 90% cov
IDH3A_PIG / P56471: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Sus scrofa	33% id, 90% cov
IDH3A_RAT / Q99NA5: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Rattus norvegicus Q99NA5: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rattus norvegicus	32% id, 90% cov
G1APK3: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rhodotorula toruloides	32% id, 89% cov
IDH1_SCHPO / O13696: Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Schizosaccharomyces pombe idh1 / RF\|NP_594397.1: isocitrate dehydrogenase (NAD+) subunit 1 Idh1; EC 1.1.1.41 from Schizosaccharomyces pombe	30% id, 94% cov
Q8LFC0: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	31% id, 89% cov
Q8U488: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Pyrococcus furiosus	30% id, 93% cov
IDH5_ARATH / Q945K7: Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial; IDH-V; Isocitric dehydrogenase 5; NAD(+)-specific ICDH 5; EC 1.1.1.41 from Arabidopsis thaliana Q945K7: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	31% id, 88% cov
IDH6_ARATH / Q8LG77: Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial; IDH-VI; Isocitric dehydrogenase 6; NAD(+)-specific ICDH 6; EC 1.1.1.41 from Arabidopsis thaliana Q8LG77: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	31% id, 88% cov
IDH1_YEAST / P28834: Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Saccharomyces cerevisiae P28834: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Saccharomyces cerevisiae	29% id, 91% cov
P93032: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	30% id, 89% cov
IDH3A_CAEEL / Q93714: Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Caenorhabditis elegans	37% id, 70% cov
idh2 / RF\|NP_595203.1: isocitrate dehydrogenase (NAD+) subunit 2; EC 1.1.1.41 from Schizosaccharomyces pombe	29% id, 88% cov
IDH2_SCHPO / Q9USP8: Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Schizosaccharomyces pombe	29% id, 87% cov
O81796: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana	29% id, 89% cov
G1APK2: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rhodotorula toruloides	29% id, 89% cov
P51553: isocitrate dehydrogenase (NAD+) (subunit 1/3) (EC 1.1.1.41) from Homo sapiens	29% id, 83% cov
O43837: isocitrate dehydrogenase (NAD+) (subunit 1/2) (EC 1.1.1.41) from Homo sapiens	28% id, 86% cov
Q8GAX0: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Acidithiobacillus thiooxidans	29% id, 63% cov
More...

ABB28_RS17455 ABB28_17500 WP_161809884.1: NADP-dependent isocitrate dehydrogenase is similar to:	PaperBLAST
A0A0M4S9Q1: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Campylobacter curvus	51% id, 36% cov
J4X756: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Campylobacter sp.	51% id, 36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

10830-12047 (frame +3) on NZ_LDJK01000073.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_73, whole genome shotgun sequence is similar to:	PaperBLAST
G1APK3: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rhodotorula toruloides Also see hits to annotated proteins above	32% id, 99% cov
IDH6_ARATH / Q8LG77: Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial; IDH-VI; Isocitric dehydrogenase 6; NAD(+)-specific ICDH 6; EC 1.1.1.41 from Arabidopsis thaliana Q8LG77: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana Also see hits to annotated proteins above	30% id, 93% cov
idh2 / RF\|NP_595203.1: isocitrate dehydrogenase (NAD+) subunit 2; EC 1.1.1.41 from Schizosaccharomyces pombe Also see hits to annotated proteins above	29% id, 96% cov
IDH2_SCHPO / Q9USP8: Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Schizosaccharomyces pombe Also see hits to annotated proteins above	29% id, 96% cov
O43837: isocitrate dehydrogenase (NAD+) (subunit 1/2) (EC 1.1.1.41) from Homo sapiens Also see hits to annotated proteins above	28% id, 99% cov
More...

128-754 (frame -3) on NZ_LDJK01000138.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_138, whole genome shotgun sequence is similar to:	PaperBLAST
J4X756: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Campylobacter sp. Also see hits to annotated proteins above	51% id, 25% cov
A0A0M4S9Q1: isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Campylobacter curvus Also see hits to annotated proteins above	51% id, 25% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory