Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.67' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS13185 ABB28_13225 WP_057509057.1: SDR family oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

34% id,
92% cov

ABB28_RS10765 ABB28_10800 WP_057508628.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

31% id,
96% cov

tdh ABB28_RS02015 ABB28_02025 WP_042615137.1: L-threonine 3-dehydrogenase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

31% id,
95% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

31% id,
95% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

30% id,
96% cov

More...

ABB28_RS02975 ABB28_02990 WP_057507196.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

32% id,
92% cov

ABB28_RS04570 ABB28_04605 WP_057507496.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

31% id,
94% cov

ABB28_RS12135 ABB28_12170 WP_057508879.1: SDR family oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
94% cov

fabG ABB28_RS01610 ABB28_01620 WP_057506951.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

29% id,
92% cov

phbB ABB28_RS07340 ABB28_07375 WP_057508010.1: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

29% id,
91% cov

ABB28_RS03105 ABB28_03125 WP_057507217.1: SDR family oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

28% id,
94% cov

phbB ABB28_RS07265 ABB28_07300 WP_057507995.1: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

28% id,
92% cov

ABB28_RS03015 ABB28_03030 WP_057507203.1: SDR family oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
93% cov

ABB28_RS09665 ABB28_09695 WP_057508430.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

25% id,
70% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 4 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

10427-11302 (frame -2) on NZ_LDJK01000061.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_61, whole genome shotgun sequence
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

33% id,
98% cov

5174-6205 (frame +2) on NZ_LDJK01000046.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_46, whole genome shotgun sequence
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

30% id,
100% cov

10925-11725 (frame +2) on NZ_LDJK01000032.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_32, whole genome shotgun sequence
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

29% id,
97% cov

61103-61918 (frame -2) on NZ_LDJK01000023.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_23, whole genome shotgun sequence
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

28% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory