Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.9' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS04570 ABB28_04605 WP_057507496.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

34% id,
99% cov

ABB28_RS10765 ABB28_10800 WP_057508628.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

34% id,
99% cov

tdh ABB28_RS02015 ABB28_02025 WP_042615137.1: L-threonine 3-dehydrogenase
is similar to:
PaperBLAST

eltD / A0QXD8: erythritol/L-threitol dehydrogenase (EC 1.1.1.56; EC 1.1.1.12; EC 1.1.1.9) from Mycolicibacterium smegmatis

34% id,
93% cov

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

33% id,
94% cov

BPHYT_RS16050: xylitol 2-dehydrogenase (EC 1.1.1.9) from Burkholderia phytofirmans

29% id,
96% cov

More...

ABB28_RS00310 ABB28_00315 WP_057506707.1: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
98% cov

ABB28_RS03015 ABB28_03030 WP_057507203.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

30% id,
99% cov

ABB28_RS13185 ABB28_13225 WP_057509057.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
100% cov

ABB28_RS12395 ABB28_12430 WP_057508928.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
97% cov

phbB ABB28_RS07265 ABB28_07300 WP_057507995.1: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

28% id,
97% cov

fabG ABB28_RS00055 ABB28_00060 WP_057506681.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
96% cov

ABB28_RS09645 ABB28_09675 WP_057508427.1: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

A0A3S7PMC4: D-xylulose reductase (EC 1.1.1.9) from Torulaspora delbrueckii

28% id,
95% cov

G3AIB3: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

29% id,
89% cov

DHSO1_YEAST / P35497: Sorbitol dehydrogenase 1; SDH 1; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.9 from Saccharomyces cerevisiae

29% id,
90% cov

More...

ABB28_RS03105 ABB28_03125 WP_057507217.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

37% id,
72% cov

phbB ABB28_RS07340 ABB28_07375 WP_057508010.1: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

27% id,
97% cov

ABB28_RS00365 ABB28_00370 WP_057506718.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

26% id,
98% cov

ABB28_RS03140 ABB28_03165 WP_057507224.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

25% id,
100% cov

ABB28_RS10520 ABB28_10555 WP_057508588.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

33% id,
69% cov

ABB28_RS09665 ABB28_09695 WP_057508430.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

DHSO_ARATH / Q9FJ95: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.56; EC 1.1.1.9 from Arabidopsis thaliana

27% id,
73% cov

A0A3S7PMC4: D-xylulose reductase (EC 1.1.1.9) from Torulaspora delbrueckii

34% id,
56% cov

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

32% id,
54% cov

More...

ABB28_RS13125 ABB28_13165 WP_057509038.1: zinc-binding alcohol dehydrogenase family protein
is similar to:
PaperBLAST

DHSO_HUMAN / Q00796: Sorbitol dehydrogenase; SDH; (R,R)-butanediol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.4; EC 1.1.1.14; EC 1.1.1.56; EC 1.1.1.9 from Homo sapiens

31% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

176350-178011 (frame +1) on NZ_LDJK01000005.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_5, whole genome shotgun sequence
is similar to:
PaperBLAST

eltD / A0QXD8: erythritol/L-threitol dehydrogenase (EC 1.1.1.56; EC 1.1.1.12; EC 1.1.1.9) from Mycolicibacterium smegmatis
Also see hits to annotated proteins above

33% id,
99% cov

BPHYT_RS16050: xylitol 2-dehydrogenase (EC 1.1.1.9) from Burkholderia phytofirmans
Also see hits to annotated proteins above

29% id,
98% cov

S6BFC0: D-xylulose reductase (EC 1.1.1.9) from Rhizomucor pusillus
Also see hits to annotated proteins above

28% id,
99% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory