Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)
Found 20 curated entries in PaperBLAST's database that match '1.13.11.5' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query
| hmgA ABB28_RS13360 ABB28_13400 WP_057509091.1: homogentisate 1,2-dioxygenase is similar to: | PaperBLAST |
RR42_RS31275: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Cupriavidus basilensis | 72% id, 94% cov |
HGD_PSEPK / Q88E47: Homogentisate 1,2-dioxygenase; HGDO; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Pseudomonas putida | 64% id, 97% cov |
PfGW456L13_4962: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens | 62% id, 98% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 19396-20754 (frame +1) on NZ_LDJK01000062.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_62, whole genome shotgun sequence is similar to: | PaperBLAST |
RR42_RS31275: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Cupriavidus basilensis | 70% id, 97% cov |
HGD_PSEPK / Q88E47: Homogentisate 1,2-dioxygenase; HGDO; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Pseudomonas putida | 63% id, 99% cov |
HGD_PSEPU / Q6EMI9: Homogentisate 1,2-dioxygenase; HGDO; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Pseudomonas putida | 61% id, 99% cov |
Lawrence Berkeley National Laboratory