Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 21 curated entries in PaperBLAST's database that match '1.2.1.79' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS05980 ABB28_06015 WP_057507768.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

Q8YR92: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Nostoc sp.

 50% id,
100% cov

SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp.
B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.

 48% id,
100% cov

A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum

 46% id,
99% cov

More...

betB ABB28_RS16890 ABB28_16935 WP_057687530.1: betaine-aldehyde dehydrogenase
is similar to:		 PaperBLAST

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

 36% id,
99% cov

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

 35% id,
98% cov

A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum

 35% id,
99% cov

More...

ABB28_RS04920 ABB28_04955 WP_057507564.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

 32% id,
98% cov

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

 32% id,
95% cov

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

 29% id,
98% cov

More...

ABB28_RS02945 ABB28_02960 WP_057507192.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

A9SS48: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Physcomitrium patens

 38% id,
83% cov

Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus

 32% id,
99% cov

GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis

 32% id,
97% cov

More...

ABB28_RS00370 ABB28_00375 WP_057506719.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

 31% id,
99% cov

SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp.
B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.

 30% id,
99% cov

A0A0J9X1M8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes

 30% id,
98% cov

More...

putA ABB28_RS08325 ABB28_08355 WP_057508189.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:		 PaperBLAST

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

 36% id,
61% cov

GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis

 31% id,
64% cov

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

 31% id,
61% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory