Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 8 curated entries in PaperBLAST's database that match '1.3.1.78' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

gnd ABB28_RS14605 ABB28_14645 WP_057509319.1: phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating)
is similar to:
PaperBLAST

tyrAa / P73906: arogenate dehydrogenase monomer (EC 1.3.1.78) from Synechocystis sp.
P73906: arogenate dehydrogenase (NADP+) (EC 1.3.1.78) from Synechocystis sp.

28% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory