Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 16 curated entries in PaperBLAST's database that match '1.4.1.16' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ilvC ABB28_RS14470 ABB28_14510 WP_057509297.1: ketol-acid reductoisomerase
is similar to:
PaperBLAST

Q7MW40: diaminopimelate dehydrogenase (EC 1.4.1.16) from Porphyromonas gingivalis

25% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory