Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)
Found 25 curated entries in PaperBLAST's database that match '1.4.4.2' as complete word(s).
These curated entries have 18 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query
| gcvP ABB28_RS13625 ABB28_13665 WP_057509138.1: aminomethyl-transferring glycine dehydrogenase is similar to: | PaperBLAST |
PS417_22360: Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Pseudomonas simiae | 65% id, 100% cov |
PfGW456L13_1868: Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Pseudomonas fluorescens | 65% id, 99% cov |
Pf6N2E2_5558: Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Pseudomonas fluorescens | 65% id, 99% cov |
| gcvH ABB28_RS15050 ABB28_15090 WP_057687194.1: glycine cleavage system protein GcvH is similar to: | PaperBLAST |
P25855: glycine cleavage system (subunit 3/5) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Arabidopsis thaliana | 44% id, 78% cov |
P23434: glycine cleavage system (subunit 3/4) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Homo sapiens | 41% id, 69% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1468-2067 (frame -1) on NZ_LDJK01000078.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_78, whole genome shotgun sequence is similar to: | PaperBLAST |
P25855: glycine cleavage system (subunit 3/5) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Arabidopsis thaliana | 44% id, 82% cov |
P23434: glycine cleavage system (subunit 3/4) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Homo sapiens | 37% id, 89% cov |
Lawrence Berkeley National Laboratory