Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

pcaF ABB28_RS09885 ABB28_09915 WP_057508480.1: 3-oxoadipyl-CoA thiolase
is similar to:		 PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

 68% id,
100% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

 49% id,
100% cov

Sama_0031: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella amazonensis

 48% id,
100% cov

More...

ABB28_RS07330 ABB28_07365 WP_057508008.1: acetyl-CoA C-acyltransferase
is similar to:		 PaperBLAST

SO1677: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) from Shewanella oneidensis

 61% id,
98% cov

Ac3H11_2994: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Acidovorax sp.

 60% id,
98% cov

PfGW456L13_2982: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Pseudomonas fluorescens

 59% id,
99% cov

More...

ABB28_RS00230 ABB28_00235 WP_057506694.1: acetyl-CoA C-acyltransferase
is similar to:		 PaperBLAST

FADA_BACSU / O32177: 3-ketoacyl-CoA thiolase; Acetyl-CoA acyltransferase; Beta-ketothiolase; EC 2.3.1.16 from Bacillus subtilis

 53% id,
99% cov

FADA_ECOLI / P21151: 3-ketoacyl-CoA thiolase FadA; Acetyl-CoA acyltransferase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta; EC 2.3.1.16 from Escherichia coli
OldA / b3845: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli
fadA / P21151: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli
P21151: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Escherichia coli

 45% id,
100% cov

fadA / A0A140NDQ6: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli

 45% id,
100% cov

More...

ABB28_RS14140 ABB28_14180 WP_152983481.1: acetyl-CoA C-acetyltransferase
is similar to:		 PaperBLAST

FADI_ECOLI / P76503: 3-ketoacyl-CoA thiolase FadI; ACSs; Acetyl-CoA acyltransferase; Acyl-CoA ligase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta; EC 2.3.1.16 from Escherichia coli
FadI / b2342: 3-ketoacyl-CoA thiolase FadI (EC 2.3.1.16) from Escherichia coli
fadI / P76503: 3-ketoacyl-CoA thiolase FadI (EC 2.3.1.16) from Escherichia coli
fadI / A0A140N9I7: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli

 38% id,
96% cov

fadA / Q5P5K2: 3-keto-acyl-CoA-thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

 35% id,
99% cov

ECHB_HUMAN / P55084: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Homo sapiens
HADHB / P55084: mitochondrial trifunctional enzyme β subunit (EC 2.3.1.16) from Homo sapiens

 39% id,
90% cov

More...

ABB28_RS03505 ABB28_03530 WP_057507300.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 32% id,
93% cov

ABB28_RS02695 ABB28_02710 WP_057507139.1: beta-ketoacyl-[acyl-carrier-protein] synthase family protein
is similar to:		 PaperBLAST

Mpe_A3367 / A2SL81: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methylibium petroleiphilum

 27% id,
60% cov

Ac3H11_2994: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Acidovorax sp.

 27% id,
60% cov

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator
Q0KBP1: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Cupriavidus necator

 29% id,
29% cov

More...

ABB28_RS04910 ABB28_04945 WP_057507562.1: enoyl-CoA hydratase
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 38% id,
24% cov

ABB28_RS05820 ABB28_05855 WP_057507779.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 37% id,
25% cov

ABB28_RS12065 ABB28_12100 WP_057508866.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

 28% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1350-2690 (frame +3) on NZ_LDJK01000025.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_25, whole genome shotgun sequence
is similar to:		 PaperBLAST

SO1677: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) from Shewanella oneidensis
Also see hits to annotated proteins above

 61% id,
100% cov

THIKA_MOUSE / Q921H8: 3-ketoacyl-CoA thiolase A, peroxisomal; Acetyl-CoA C-myristoyltransferase; Acetyl-CoA acyltransferase A; Beta-ketothiolase A; Peroxisomal 3-oxoacyl-CoA thiolase A; EC 2.3.1.16; EC 2.3.1.155; EC 2.3.1.9 from Mus musculus
Q921H8: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Mus musculus
Also see hits to annotated proteins above

 36% id,
96% cov

THIKB_MOUSE / Q8VCH0: 3-ketoacyl-CoA thiolase B, peroxisomal; Acetyl-CoA acyltransferase B; Beta-ketothiolase B; Peroxisomal 3-oxoacyl-CoA thiolase B; EC 2.3.1.155; EC 2.3.1.16; EC 2.3.1.9 from Mus musculus
Q8VCH0: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Mus musculus
Also see hits to annotated proteins above

 36% id,
96% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory